Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3375 ATGGCTACATCTTGGTTGAATTGGAATTGGAATTGGAATACCCTTTTGAGTAAGATCCTTGAATTGCCTGTTTTGGAACTTGTGGCAATATTTACTAATTTGGTTCTTCTTGTTTTGTTTCTATTGAGGGAGGTTTTTATTTGTGTTGGTGGAAGAGTTTGGTTTTTTAAGGATAATAATAATGTTGTTGTTGGAAATGGTGGTTTGATTCGTGTCGATGGAGAAACGGTTGAGGTTAGAATTGGGACATGGTTTAAGTTATCTGTGCTGTCTTGTTTTTATGTTTTGTTGGTGCAAGTTTTGGTTTTGGGATTTGAGGGTGTTGTTTTGATTAAGGACAAGTTTGTGGTTGTGGAAGATTTGTCTCTTCTTTGTGTGCCTTTTGTGCAAAGTTTGGTTTGGATTGTGTTGTGTTTCGCTGCTTTGCATTGCAAGTACAAGGTATCTCAGAAGTTTCCAATTTTGCTGAGAGTTTCTTGGTTTGTGCTGTTTGTTGTTTGTTTGTGTGGTTTATATGTTGATGGGAGAGGGTTTTGGGTGGAAGGTTCCAAACATATGCGTTCTCATGTTTTGGCAAATTTCGCTGTTACCCCTGCTCTTGCCTTCTTGTGTTTTGTAGCAATTAGGGGTGTTTCTGGTATACAAGTTTGTAGGAACTCTGAGAATCAACAGCCATTACTTCTTGATGAAGAGGAAGATGAAGAACCAGGGTGCCTTAAGGTTACTCCTTATAGTGATGCTGGACTTTTTAGTTTGGCCACTTTGTCTTGGCTTAACTCGATTCTTTCCATTGGTGCAAAGAGACCACTTGAGCTTAAGGACATTCCCCTTGTTGCGCCTAAAGATCGAGCTAAAGCAAATTTTAAGGTTTTGAATTCAAATTGGGAGAAAATGAAGGCTGAAAACACGTCGACTCAGCCTTCATTAGCTTGGACACTTCTGAAGTCATTCTGGAAGGAGGCAGCTATTAATGCCATTTTTGCTGGTGTCACTACTCTTGTCTCATATGTAGGTCCATACATGATAAGTTACTTTGTTGATTACTTGAGTGGTATAGAGACTTACCCTCATGAGGGGTATGTCCTTGCCGGAATATTCTTTGTTGCAAAGCTTGTGGAGACCTTCACAACGAGGCAATGGTATCTAGGAGTGGACATTTTGGGGATGCATGTTAGGTCCGCTTTAACAGCCATGGTATATCAAAAGGGGCTTAGGTTGTCGAGCTTAGCTAGGCAAAGTCACACAAGTGGTGAGATTGTTAACTACATGGCTATTGATGTTCAGAGGGTAGGGGACTACTCTTGGTATCTTCATGACATGTGGATGCTTCCTCTGCAGATTATTCTAGCCCTCGCAATTTTGTATAAGAATGTTGGAATTGCTTCCATTGCAACACTTGTTGCCACAATCATTTCTATTGTAGTCACTATTCCCGTGGCTCGGGTCCAAGAAGATTATCAAGACAAATTAATGGCTGCTAAGGATGAAAGAATGAGAAAAACATCTGAGTGCCTAAGGAACATGAGGATTCTCAAGCTTCAGGCTTGGGAGGACAGATATCGAATAAGATTAGAGGAAATGCGTGGGGTAGAGTTCAAGTGGCTTAGGAAAGCCCTATATTCTCAGGCTTTCATAACTTTCATGTTCTGGAGCTCACCTATATTTGTTTCAGCTGTCACTTTCGCTACTTGCATATTGTTGGGTGGTAAGCTAACTGCAGGAGGTGTACTTTCTGCTCTAGCGACTTTCAGGATCCTCCAAGAACCGTTGAGGAATTTTCCAGACTTGGTATCTACAATGGCTCAGACAAAAGTTTCTGTCGATCGTTTATCTTGTTTCCTACTCGAGGAAGAATTGCAGGAAGATGCAACTATTGTCTTGCCACAAGGAATTTCTAACATTGCCATAGAAATTAAGGATAGTGAATTCTCTTGGGACCTTTCATCTGCCAGGCCTACTCTTTCTGAGATAAATATGAAAGTTGAAAAAGGGATGCGTGTCGCTGTTTGCGGTACGGTTGGTTCAGGGAAATCAAGTTTTCTTTCTTGCATCCTTGGAGAAATTCCTAAGCTTTCTGGTGAAGTCAGTGTGTGTGGTTCTTCTGCATACGTCTCCCAATCAGCATGGATACAATCAGGAACTATAGAAGAAAATATACTCTTTGGAAGCCCAAAGGACAAAGCAAAGTACAAGAATGTTATTCATGCTTGTTCACTGAAAAAGGATCTAGAACTTTTCTCACATGGAGATCAGACAATTATTGGTGATAGAGGTATAAACCTAAGTGGGGGTCAGAAGCAGCGGGTACAGCTTGCCCGAGCACTCTACCAAGATGCTGATATTTATCTTCTTGATGATCCCTTCAGCGCAGTTGACGCACACACTGGATCAGAGTTGTTTAGGGAGTATATATTGACGGCACTAGCAAATAAAACAGTCATTTTCGTGACCCATCAAGTTGAATTTCTTCCTGCTACTGATTTGATACTGGTTCTCAAGGAAGGTTGCATCATACAAGCCGGAAAGTATGATGATCTTTTACAAGCAGGAACAGATTTTAAAGCTCTAGTTTCAGCTCACCATGAAGCCATAGAGGCTATGGATATTCCTGCTCACTCCTCTGAAGATTCAGACGAAAATTTAACATTGGAGGCATCTGTTATGACCACTAAGAAGTCCATGTGTTCTGCTAACGATATCGACAGTTTGACAAAGGAAATGCAAGAGGGACCATCATCTTCAGATCAAAAAACAACTAAGGAGAAGAAAAAAGCAAAAAGGTCGAGAAAAAAACAGCTCGTTCAAGAAGAGGAGAGGGTTAGAGGTAGAGTAAGCATGAAGGTGTATCTTTCATACATGGCAGCGGCATATAAAGGTTTATTGATTCCACTCATAATCATAGCACAAGCGTTATTTCAGTTCCTTCAGATTGCTAGTAACTGGTGGATGGCGTGGGCTAACCCTCAAACAGAAGGAGATGAGCCCAAAGTAACTCCCATGGTTCTTCTTCTTGTTTACATGGCCCTTGCTTTTGGCAGTTCTTGGTTTATATTTGTAAGGGCTGTTCTAGTCGCTACATTTGGTCTCGCAGCTGCACAGAAGCTATTCTTGAAGATGCTTAGATGTGTTTTCCATGCACCGATGTATTTCTTTGACTCTACACCAGCTGGAAGGATCTTGAACCGGGTTTCAGTTGATCAAAGTGTTGTGGATCTTGACATCCCTTTTAGACTTGGTGGGTTTGCTGCAACAACAATACAGCTTATTGGTATTGTTGGCGTAATGACAGAAGTGACATGGCAAGTTTTACTCTTAGTCATCCCAATGGCCATTGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCATCGAGGGAACTGGTCCGAATTGTAAGCATCCAGAAATCACCAATTATAAATCTTTTTGGTGAATCAATTGCTGGAGCATCCACCATCAGGGGTTTCGGACAAGAAAAAAGGTTCATGAAGCGAAACCTCTATCTTCTTGATTGTTTTGCACGACCTTTCTTCTGCAGTCTTGCTGCTATTGAGTGGCTCTGCCTGCGTATGGAGTTATTGTCCACCTTTGTGTTTGCTTTCTGCATGGTATTACTTGTTAGCTTTCCCCATGGAACTATTGACCCAAGCATGGCTGGACTTGCTGTGACATATGGTCTGAACTTAAATGCGCGCTTATCCCGTTGGATACTTAGCTTTTGCAAACTTGAAAATAAAATTATATCTATTGAGAGAATTTATCAGTACAGTCAAATTCCTAGTGAAGCACCGGCAGTGATTGAAGATTCTCGCCCTCCATCTTTATGGCCTGAAAATGGCACAATTGAAATAATTGATTTGCAGGTCCGTTACAAAGAAAATCTTCCTTTTGTGCTTCATGGAGTATCATGCACATTTCCTGGTGGAAAAAATATAGGGATAGTTGGACGAACCGGCAGTGGCAAATCTACTTTGATTCAAGCATTGTTTCGATTGATTGAACCATCAGGTGGAAGTATCCACATAGACAACATCAATATTTCAGAGATTGGTCTTCATGACCTCCGAAGCCATCTCAGTATCATACCACAGGATCCAACCTTATTTGAAGGGACCATTCGAGGCAATCTTGATCCTCTTGAGGAGCACTCAGATAAAGATATTTGGGAGGCGCTAGATAAGTCTCAACTTGGAGATATCATTCGTGAGAAAGGACAAAAGCTTGATACACCAGTTATAGAGAATGGAGACAATTGGAGTGTAGGACAGAGGCAACTTGTTTCTCTTGGCCGAGCTCTACTGAAGCAGTCAAAAATACTTGTACTTGATGAAGCAACAGCATCCGTCGATGCTGCCACTGATAATCTTATCCAGAAGATCATTCGAACAGAGTTCAAAGAGTGCACTGTGGTCACCATTGCGCATCGTATTCCTACTGTCATTGACAGCGATCAAGTTCTGGTGCTCAGTGATGGTCGAGTTGCTGAGTTTGACACCCCTTTACGACTATTAGAGGACAAATCATCCATGTTTCTAAAGTTGGTGACTGAGTACTCCTCGCGGACAAGTGGTATACCAGAATTTTAG 4584 0.4145 MATSWLNWNWNWNTLLSKILELPVLELVAIFTNLVLLVLFLLREVFICVGGRVWFFKDNNNVVVGNGGLIRVDGETVEVRIGTWFKLSVLSCFYVLLVQVLVLGFEGVVLIKDKFVVVEDLSLLCVPFVQSLVWIVLCFAALHCKYKVSQKFPILLRVSWFVLFVVCLCGLYVDGRGFWVEGSKHMRSHVLANFAVTPALAFLCFVAIRGVSGIQVCRNSENQQPLLLDEEEDEEPGCLKVTPYSDAGLFSLATLSWLNSILSIGAKRPLELKDIPLVAPKDRAKANFKVLNSNWEKMKAENTSTQPSLAWTLLKSFWKEAAINAIFAGVTTLVSYVGPYMISYFVDYLSGIETYPHEGYVLAGIFFVAKLVETFTTRQWYLGVDILGMHVRSALTAMVYQKGLRLSSLARQSHTSGEIVNYMAIDVQRVGDYSWYLHDMWMLPLQIILALAILYKNVGIASIATLVATIISIVVTIPVARVQEDYQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRIRLEEMRGVEFKWLRKALYSQAFITFMFWSSPIFVSAVTFATCILLGGKLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSVDRLSCFLLEEELQEDATIVLPQGISNIAIEIKDSEFSWDLSSARPTLSEINMKVEKGMRVAVCGTVGSGKSSFLSCILGEIPKLSGEVSVCGSSAYVSQSAWIQSGTIEENILFGSPKDKAKYKNVIHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALANKTVIFVTHQVEFLPATDLILVLKEGCIIQAGKYDDLLQAGTDFKALVSAHHEAIEAMDIPAHSSEDSDENLTLEASVMTTKKSMCSANDIDSLTKEMQEGPSSSDQKTTKEKKKAKRSRKKQLVQEEERVRGRVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDEPKVTPMVLLLVYMALAFGSSWFIFVRAVLVATFGLAAAQKLFLKMLRCVFHAPMYFFDSTPAGRILNRVSVDQSVVDLDIPFRLGGFAATTIQLIGIVGVMTEVTWQVLLLVIPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFGESIAGASTIRGFGQEKRFMKRNLYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMVLLVSFPHGTIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAVIEDSRPPSLWPENGTIEIIDLQVRYKENLPFVLHGVSCTFPGGKNIGIVGRTGSGKSTLIQALFRLIEPSGGSIHIDNINISEIGLHDLRSHLSIIPQDPTLFEGTIRGNLDPLEEHSDKDIWEALDKSQLGDIIREKGQKLDTPVIENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDAATDNLIQKIIRTEFKECTVVTIAHRIPTVIDSDQVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRTSGIPEF* 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3375 1527 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 322 602 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3375 1527 Pfam ABC transporter 1298 1446 IPR003439 GO:0005524
Tpr6g3375 1527 Pfam ABC transporter 654 788 IPR003439 GO:0005524
Tpr6g3375 1527 SMART AAA_5 1307 1492 IPR003593 -
Tpr6g3375 1527 SMART AAA_5 663 844 IPR003593 -
Tpr6g3375 1527 CDD ABCC_MRP_domain1 636 835 - -
Tpr6g3375 1527 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 1527 - -
Tpr6g3375 1527 SUPERFAMILY ABC transporter transmembrane region 310 610 IPR036640 GO:0005524|GO:0016021
Tpr6g3375 1527 MobiDBLite consensus disorder prediction 906 936 - -
Tpr6g3375 1527 CDD ABC_6TM_ABCC_D2 962 1256 IPR044726 GO:0140359
Tpr6g3375 1527 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 636 859 IPR003439 GO:0005524
Tpr6g3375 1527 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 1527 - -
Tpr6g3375 1527 SUPERFAMILY ABC transporter transmembrane region 961 1261 IPR036640 GO:0005524|GO:0016021
Tpr6g3375 1527 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 964 1234 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3375 1527 CDD ABC_6TM_ABCC_D1 323 610 IPR044746 GO:0140359
Tpr6g3375 1527 Pfam ABC transporter transmembrane region 964 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3375 1527 Pfam ABC transporter transmembrane region 324 590 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tpr6g3375 1527 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524
Tpr6g3375 1527 Gene3D - 1264 1517 IPR027417 -
Tpr6g3375 1527 CDD ABCC_MRP_domain2 1279 1499 - -
Tpr6g3375 1527 Gene3D ABC transporter type 1, transmembrane domain 310 612 IPR036640 GO:0005524|GO:0016021
Tpr6g3375 1527 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1281 1515 IPR003439 GO:0005524
Tpr6g3375 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1271 1510 IPR027417 -
Tpr6g3375 1527 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 858 IPR027417 -
Tpr6g3375 1527 Gene3D - 613 879 IPR027417 -
Tpr6g3375 1527 Gene3D ABC transporter type 1, transmembrane domain 923 1262 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3375 Tpr-Chr6 36402391 36410725 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3375 636 852 Calmodulin-binding Proteins AT2G36910 30.932 2.11e-21 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3375 - - gmx:100790550 2558.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3375 6 36402391 36410725 Tpr6g3375 6 36402391 36410725 ECH