Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3374 ATGAGACGCCGCCCTTTACCGGGCATTCTCTCCAATCAAATGGAGAAATCAACAATCAAAACCCCCAATTCACGTATCTTCTTCCTCGCTTCTCTCTCTGCTTTTTTCTGGCTTTTACTCCTTTACTTCCATTTCATCATCCTCCCCCAATCCACCACCACCACCACCACCACCACCACACCACCCAGGAAGAATTTCGGCTTCCCTGATGTCAAAAACCAAAACCCAATTCAAATCCATCAAAAAAATTTAACCTTTATCACATCATCACTTGAAACTGATCCATGTGTAGGTAGATACATTTATGTTCATGATCTTCCTTCAAGGTTCAACCAAGACATGTTAAGAGATTGTAAAAGTTTAAGTCTTTGGACCAATATGTGTAAGTTTGTAACCAATGCAGGTCTTGGTCCTCCGCTTGAGAATGTCGATGGAGTTTTCTCTGATACTGGTTGGTATGCTACTAATCAGTTTGCAGTTGATGTTATTTTTGCTAATAGAATGAAACAATATGAATGTTTGACTAATGATTCTTCAATTGCTGCTGCTGTTTTTGTACCTTTTTATGCTGGTTTTGATATTGCTAGATATCTTTGGGGTTATAATATTTCTATGAGAGATGCTGCTTCTATTGATCTTGTTGACTGGCTTGTGAAGAGACCTGAATGGAGTGTTATGAATGGGAGAGATCATTTTCTTGTTGCTGGTAGGATAACTTGGGATTTTAGGAGATTGTCTGAGGAAGAAACGGATTGGGGGAACAAGCTTTTGTTTTTACCTGCTGCTAAGAATATGTCTATGCTTGTTGTTGAATCTAGTCCTTGGAATGCTAATGATTTTGGGATTCCTTATCCTACTTATTTCCACCCTGCAAAAGATGCAGATGTGTTTGTTTGGCAGGAGAGGATGAGAAGGTTGGAGAGGAAATGGCTTTTCTCTTTTGCTGGTGCGCCGCGTCCTGATAATCCAAAATCGATTAGGGGTCAAATAATTGAGCAATGTAGGAGTTCTAAAGTTGGGAAGCTTTTGGAGTGTGATTTTGGGGAGAGTAAATGTCATTCTCCTAGTTCTATAATGCAGATGTTTCAGGGGTCACTTTTTTGTCTTCAACCTCAGGGTGATTCTTATACAAGAAGATCTGCTTTTGATTCAATGCTAGCAGGTTGTATACCCGTGTTTTTCCATCCGGGTTCGGCGTATACGCAATATACTTGGCATCTTCCTAAGGATTATACTAAGTATTCTGTGTTCATTCCTGAGGATGATATTCGGAAGAGGAATGTTAGTATAGAGGAGAGGCTTAGTCAGATACCTGAGGAGCAAGTGAGGATTATGAGAGAGGAGGTGATTAGTCTCATTCCTAGATTAGTGTATGCTGATCCTCGTTCTAAGTTAGAGACTTTGAAAGATGCTTTTGATGTTTCTGTACAAGCGGTGATTGATAAGGTTACCAATTTGAGGAAGGATATTATCGAAGGTCGCACGGATGAAAACTTCATCGAGGAGAATAGTTGGAAATATGCATTGTTGGATGAGGGACAGCGTGAGGTAGGACCTCATGAATGGGATCCTTTCTTTTCTAAACCCAAGGATGGAAATGGGGAATCCAGTGACTCCTCTGCTGAAGTTGCAAAAAATTCTTGGAAAAATGAACAAAGAACTCAATCGTGA 1671 0.4022 MRRRPLPGILSNQMEKSTIKTPNSRIFFLASLSAFFWLLLLYFHFIILPQSTTTTTTTTTPPRKNFGFPDVKNQNPIQIHQKNLTFITSSLETDPCVGRYIYVHDLPSRFNQDMLRDCKSLSLWTNMCKFVTNAGLGPPLENVDGVFSDTGWYATNQFAVDVIFANRMKQYECLTNDSSIAAAVFVPFYAGFDIARYLWGYNISMRDAASIDLVDWLVKRPEWSVMNGRDHFLVAGRITWDFRRLSEEETDWGNKLLFLPAAKNMSMLVVESSPWNANDFGIPYPTYFHPAKDADVFVWQERMRRLERKWLFSFAGAPRPDNPKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQGSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKDYTKYSVFIPEDDIRKRNVSIEERLSQIPEEQVRIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAVIDKVTNLRKDIIEGRTDENFIEENSWKYALLDEGQREVGPHEWDPFFSKPKDGNGESSDSSAEVAKNSWKNEQRTQS* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3374 556 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 84 510 IPR004263 GO:0006486|GO:0016757
Tpr6g3374 556 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 16 54 IPR004263 GO:0006486|GO:0016757
Tpr6g3374 556 MobiDBLite consensus disorder prediction 520 556 - -
Tpr6g3374 556 Pfam Exostosin family 96 433 IPR040911 -
Tpr6g3374 556 MobiDBLite consensus disorder prediction 532 556 - -
Tpr6g3374 556 PANTHER BNAA09G10260D PROTEIN 84 510 - -
Tpr6g3374 556 PANTHER BNAA09G10260D PROTEIN 16 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3374 Tpr-Chr6 36395495 36397827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3374 K20888 - gmx:100811811 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3374 6 36395495 36397827 Tpr6g3374 6 36395495 36397827 ECH