Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3362 ATGTTGCTAAGAAGCTCATCAACACCAGTTCTTGGTTCTCTCCTCTCTTCAAGTTCCTTCACAGATAGTCCTATTCATCATAATCATAGTCTTCATCCTGAATCATGTCATGCACTTAAGCATTTACCACTCCAACATCATCATCATAGTAACAAGATCTCATGCAGTTCTTCTCCAATCTCACCTTCAATTTCTGATCTTGAAAGGCAAAAGAAAGGGTTGGTTAGAAGAGTACAATCTGAAGGGAACTTGGAAGACTTGGCCTTTGCTACTTGCAACAACAATGAAGATAGATTCAATTATATGGACTCTTCTTCTAAGAGGTATTCAGTGAGACAAAGATGCTTGGCACTTGAGACCATTCCATCTTTCACTCTTTCTAAGCATACAGGTTTGCGGGAAGAAGAGGAAGATGAAGATGAGGAAAGTGATATTGAAGATGAAGGTTATGAGTTCAGTGTGATGAACAGTAGAAGTGGTGTGATGCAGACTGAAGAAGTGAGGGTGAATGATAAAGTTAGCAGGGTGAGTTTTGGTAATAAAGAGATGTATCTTGCAAAAGGGCTTGGTGTTGATGTGAGTGGTGATGGCATAGATGGTGGTTGCAGAGGAGGCAATGGAGGTGGTGATTATAATTCCATGGGATCTGGAGGGAATGATGGAGATAGTAATCATGGGGTGGAAGAATATTACAAGAAAATGGTGCAGCAAAATCCAGGGAACTCATTGTTTCTGAGGAATTATGCTCAGTTTTTGTATCAGAGCAAAAAAGACCGCGGAGGAGCTGAGGAGTATTATTCCAGAGCCATACTAGCAGATCCAAATGATGGAGAAGTTCTATCACAGTATGGAAAACTAGTTTGGGAACTACATCATGATGAAGAAAGAGCCACTAGCTATTTTGAAAGAGCAGTACAAGCTTCTCCTGATGACAGCCATGTACAAGCAGCATATGCAAGTTTCCTTTGGGGCACAGAGGAAGATGAAGATGCAAGTTCCAATGACCCAAAATGTTTACCTCAACATTTCCATTTTGGAGCTATGGCTACTACAGGTTCATAG 1062 0.4087 MLLRSSSTPVLGSLLSSSSFTDSPIHHNHSLHPESCHALKHLPLQHHHHSNKISCSSSPISPSISDLERQKKGLVRRVQSEGNLEDLAFATCNNNEDRFNYMDSSSKRYSVRQRCLALETIPSFTLSKHTGLREEEEDEDEESDIEDEGYEFSVMNSRSGVMQTEEVRVNDKVSRVSFGNKEMYLAKGLGVDVSGDGIDGGCRGGNGGGDYNSMGSGGNDGDSNHGVEEYYKKMVQQNPGNSLFLRNYAQFLYQSKKDRGGAEEYYSRAILADPNDGEVLSQYGKLVWELHHDEERATSYFERAVQASPDDSHVQAAYASFLWGTEEDEDASSNDPKCLPQHFHFGAMATTGS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3362 353 MobiDBLite consensus disorder prediction 128 147 - -
Tpr6g3362 353 SMART hat_new_1 292 324 IPR003107 GO:0006396
Tpr6g3362 353 SMART hat_new_1 222 254 IPR003107 GO:0006396
Tpr6g3362 353 SMART hat_new_1 257 289 IPR003107 GO:0006396
Tpr6g3362 353 PANTHER OSJNBA0004N05.2 PROTEIN 1 335 - -
Tpr6g3362 353 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 1 335 - -
Tpr6g3362 353 Gene3D Tetratricopeptide repeat domain 220 334 IPR011990 GO:0005515
Tpr6g3362 353 SUPERFAMILY TPR-like 228 331 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3362 Tpr-Chr6 36274382 36276570 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3362 - - mtr:MTR_7g098450 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3362 6 36274382 36276570 Tpr6g3362 6 36274382 36276570 ECH