Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3360 ATGGGGGATACTGAACCAATGGTTACAGAAACATCTGCTGTTGAGACGTATCCATCGGATGGTTACAATAACACCGCTTCGGATCCGGTTCCCGAGGCTGCTGCTCCTGCTCCTGCTGAGGTTGCAGGAGAAGCTGGTGTTCAGGATAATTCAAGCTATGAGTTAGGTGATGGGAATGCTTATACTGCCGGGGATCCTAATTCTGTACTTCAACAAGCTCAGTTTAGTGCAACAAATGAGTCCAAGCAAGTTGCTGGAGTGCCTGATGCTAACTCGGGTGCGGTTGGAAATGAAGCTACGGATTCTACTATGGTTTCTGGCGAACATTTGTCTGTAAATGGCGGTGTTGATACAGTTGGACTTGAAAATGGAAATGCATTGGAGCATGTTAATGGGTCAGCTGATGAGAAACAGCTTACAGATGCTTACGCTGCTCTGTCTGCTGAAGAGGATAGACTGTGGAATATTGTAACAGCTAATTCGTCAGATTTTACTGCTTGGACTTCTTTGATTGAAGAGACTGAGAAGGTGGCAGAGAACAACATTTTGAAGATTCGTAGAGTCTATGATGCTTTCCTGGCAGAATTCCCTTTGTGTTATGGGTATTGGAAAAAATATGCTGACCATGAGGCGCGTCTTGGCACTGCTGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGGGTTACATATTCAGTGGACATGTGGTTACATTATTGCATATTTGCCATAAACACCTATGGAGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCATTTCCTCTTTGGGATAAATACATTGAATATGAGTATATACAGCAAGACTGGGCGCGCCTTGCGATGATCTACACCAGAATATTAGAGAATCCAAATCAGCAGTTGGATCGGTATTTCAACAGCTTCAAGGAGTTGGCTAGTAATCGACCTTTGTCAGAATTACGGACAACTGATGAAGCTACTGCAGCGGCAGGTGTTGTTTCAGAGGGTACTGACCAGGGTGTTGAAGGAGAGGTTCGTCTGGATGGTGCGGAGAGTTCTCCTAAACCTGTAAATGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGCCATTAGAGAAGAGATGTATAAGAAAGCTAAAGAGTTTGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCTCTTAATATTGGGGAGCTTGAGAATTGGCATAACTATCTGGACTTCATAGAAAGAGAAGGTGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCCTGTGCCAATTATCCCGAGTACTGGATACGCTATGTTTTGTGTATGGAAGCTAGTGAAAGTGTGGATCTTGCAAATAATGTTCTTGCCCGGGCAAGCCAAGTCTTTGTCAAGAGACAACCTGAGATACATCTTTTTTGTGCTCGGTTCAAGGAGCAGGCTGGAGATATAGTGGGTGCCAGAGCTGCATATCAACTTGTGCATACTGAAATTTCTCCAGGTCTTCTTGAAGCAATAATCAGGCATGCCAATATGGAACATCGATTGGGGAAGTTGGAGGATGCCTTCTCTTTGTATGAACAAGCCATTGCCATTGAAAAAGGGAAAGAACATTCACAAACACTGCCAATGTTGTTTGCTCAGTATTCTCGATTTGTTTATTTGGCTGCTGGGAATGCAGAAAAGGCTAGAGAGATTTTAGTTGGGGGACTTGAGAATGCTTCCCTGTCAAAGCCACTTCTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCCAGCCAAAGCGAATTAACATTGACTTTCTCGAGTCATTGGTTGTAAAATTCATAACGCCCAACCCAGAGAACCCTGGTGTAGCAAGTGCAACAGAACGCGAGGAACTTTCTTCTATTTTTCTAGAGTTTTTAAATCTCTTTGGAGATGTTCAATCTATCAAAAGGGGTGAGGATAGACATGCCAAACTGTTCTTGCCACACAGGAGCTTGTCGGAGTTGAAAAAACGTCATGCAGAGGATTTCCTTGCTTCAGATAAAACAAAAGTGGCGAGAGCTTATTCTGCTCAATCACCTGCCCAATCTGCAATCGGTGCATATCCAAATGCACCTAACCAATGGACTAACTATGGAGTACAGCCACAGACTTGGCCTGCGACAACACAAGCACAAGGACAACAATGGCCTGCTGGCTACACTCAGCAGCAGGCTTCCTATGGGGCTTATGCTGGATATGGAGGTAACTATGCTAACCCACAATTGCCCGCATCAGTTCCACCTAGCACTGCTTATGCTTATCCTCCTACATATCCTGCACAGCCGGCCCTGCCTCAACAAAGTTATGCACAACCTGTTGCAGCCCCGACACAGCAACCTGCAGCAGTTCCTCAGGCCTATTACGGGAGTTACTACTGA 2457 0.4428 MGDTEPMVTETSAVETYPSDGYNNTASDPVPEAAAPAPAEVAGEAGVQDNSSYELGDGNAYTAGDPNSVLQQAQFSATNESKQVAGVPDANSGAVGNEATDSTMVSGEHLSVNGGVDTVGLENGNALEHVNGSADEKQLTDAYAALSAEEDRLWNIVTANSSDFTAWTSLIEETEKVAENNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGTADKVVEVYERAVQGVTYSVDMWLHYCIFAINTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYIQQDWARLAMIYTRILENPNQQLDRYFNSFKELASNRPLSELRTTDEATAAAGVVSEGTDQGVEGEVRLDGAESSPKPVNAGLTEAEELEKYIAIREEMYKKAKEFDSKIIGFETAIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASESVDLANNVLARASQVFVKRQPEIHLFCARFKEQAGDIVGARAAYQLVHTEISPGLLEAIIRHANMEHRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLAAGNAEKAREILVGGLENASLSKPLLEALLHFEAIQPQPKRINIDFLESLVVKFITPNPENPGVASATEREELSSIFLEFLNLFGDVQSIKRGEDRHAKLFLPHRSLSELKKRHAEDFLASDKTKVARAYSAQSPAQSAIGAYPNAPNQWTNYGVQPQTWPATTQAQGQQWPAGYTQQQASYGAYAGYGGNYANPQLPASVPPSTAYAYPPTYPAQPALPQQSYAQPVAAPTQQPAAVPQAYYGSYY* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3360 818 MobiDBLite consensus disorder prediction 1 46 - -
Tpr6g3360 818 SUPERFAMILY TPR-like 157 320 IPR011990 GO:0005515
Tpr6g3360 818 Gene3D Tetratricopeptide repeat domain 409 709 IPR011990 GO:0005515
Tpr6g3360 818 PANTHER PRE-MRNA-PROCESSING FACTOR 39 79 804 - -
Tpr6g3360 818 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 79 804 - -
Tpr6g3360 818 MobiDBLite consensus disorder prediction 9 26 - -
Tpr6g3360 818 SUPERFAMILY TPR-like 373 678 IPR011990 GO:0005515
Tpr6g3360 818 SMART hat_new_1 214 246 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 429 461 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 180 212 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 533 568 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 574 606 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 286 319 IPR003107 GO:0006396
Tpr6g3360 818 SMART hat_new_1 249 284 IPR003107 GO:0006396
Tpr6g3360 818 Gene3D Tetratricopeptide repeat domain 155 324 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3360 Tpr-Chr6 36257163 36266485 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3360 K13217 - gmx:100787373 1252.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3360 6 36257163 36266485 Tpr6g3360 6 36257163 36266485 ECH