Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3332 ATGCTCAAACTCACATTTTCCTTCTTCTCAATGGCGAACAAACCGTTTCTCTTCTTCTCCGTTCTCCTTACGTTTCTCGCCGTTGCCGGAGGAGATACCGGCGAAGCCTCCGAACTCGACTACTCCAAACTCTCCGGCATTATTATCCCTGGCTTCGCTTCTACTCAGCTTCGAGCATGGTCTATTCTTGATTGTCCTTACTCTCCTCTCGATTTCAATCCTCTCGATTTGGTTTGGCTCGATACTACAAAACTTCTTTCTGCTGTGAATTGTTGGCTTAAGTGCATGTTGTTGGACCCTTACAACCAGACAGATCATCCTGATTGTAAGTCCCGTCCTGATAGCGGTCTTTCTGGAATTACTGAACTCGATCCAGGTTATATAACAGGACCTCTTTCGTCTGTATGGAAAGAATGGATTAAGTGGTGTATTGAATTTGGCATAGAAGCTAATGCAATAATTGCTGTTCCTTATGATTGGAGACTGTCACCGTCTATGCTTGAAGAACGGGACCTTTACTTTCATAAGCTTAAATTGACATTTGAGACTGCTTTCAAACTTCGAGGTGGCCCCTCTTTAGTTTTTGCCCATTCCTTGGGAAATAATGTTTTTCGTTATTTCTTGGAGTGGTTGAAGCTAGAAATTGCTCCAAAACATTATATCGAATGGTTGGATCAACATATTCATGCCTATTTTGCTGTTGCTGCCCCCCTTCTTGGTGCAACTGAAACCGTTGAAGCAACACTTTCTGGATTCACATTTGGTCTTCCAGTATCTGAGGGAACAGCTCGATTGATGTTCAACTCATTTGCTTCGTCATTGTGGATGATGCCTTTTTCCAAGTATTGTAGAACAAGTAATAAATATTTCAAGCATTTTTCTGGAGGAAAGCAAGCAGGTACCCATACATATCACTGTGAAGAGGAGGAGTTTAAATCAAACGTATCTGGATGGCCAACAAAGATAATCAACATTGAAATTCCCTCAACCCGAGGATTTGAAGCATATCCCTCATTTTCAGAAATACCTGAGGCCAACTTGTCTGGAATGGAATGTGGACTACCTACTCAATTATCTTTCTCAGCTCGTGAAATAGCAGATGGCACCTTTTTCAAGGCAATTGAAGATTATGACCCAGACAGCAAGAGGCTCTTGTACCAGTTAGAGAAATCATATCTTGGTGATCCTGTTCTTAATCCACTTACACCTTGGGACCGGCCACCAATAAGAAATGTCTTTTGCATTTATGGCACTAATTCAAAGACAAAGGTTGGTTACTACTTTGCCCCTAGCGGCAAGCCGTACCCTGATAACTGGATCATTACGGATGTCGTTTCCGAGTATGAAGGAACTCTAGTCTCAAGGTCAGGGAATCTGGTTGAAGGGAACCCTGGAGCTATAAGTGGTGATGAGACGGTTCCATACAATTCCCTTTCCTGGTGCAAAAATTGGCTGGGACCAAAGGTGAACATCACAAGAGCTCCTCAGCCAGAGCACGATGGCTCAGATGTACAGATTGATTTGAATGTGGAACATCACTATGAAGAAGATATTGTTCCAAACATGACTAGACTTCCTAGGGTTAAGTACATAACATATTATGAAGATTCCGAAAGCCTTCCAGGAATGAGGACAGCAGTTTGGGAGCTTGATAAAGCAAATCACAGGAACATTGTTAGATCATCGGTGCTAATGAGGGAATTATGGCTTGAGATGTGGCGTGATATACATCCTGACGCAAAATCAGAATTTGTGACAAAAGCTAAGCGTGGACCTTTAAGAGACGAGGACTGCTATTGGGATTATGGGAAAGCTCGCTGTGCATGGCCAGATTATTGTGAATATAGGTATGTTTTTGGTGATGTTCACTTGGGACAAAGCTGCAGGTTGAGATATACTGCAGCTGAACTGTTGTTGCATTATTTGTAA 1929 0.4241 MLKLTFSFFSMANKPFLFFSVLLTFLAVAGGDTGEASELDYSKLSGIIIPGFASTQLRAWSILDCPYSPLDFNPLDLVWLDTTKLLSAVNCWLKCMLLDPYNQTDHPDCKSRPDSGLSGITELDPGYITGPLSSVWKEWIKWCIEFGIEANAIIAVPYDWRLSPSMLEERDLYFHKLKLTFETAFKLRGGPSLVFAHSLGNNVFRYFLEWLKLEIAPKHYIEWLDQHIHAYFAVAAPLLGATETVEATLSGFTFGLPVSEGTARLMFNSFASSLWMMPFSKYCRTSNKYFKHFSGGKQAGTHTYHCEEEEFKSNVSGWPTKIINIEIPSTRGFEAYPSFSEIPEANLSGMECGLPTQLSFSAREIADGTFFKAIEDYDPDSKRLLYQLEKSYLGDPVLNPLTPWDRPPIRNVFCIYGTNSKTKVGYYFAPSGKPYPDNWIITDVVSEYEGTLVSRSGNLVEGNPGAISGDETVPYNSLSWCKNWLGPKVNITRAPQPEHDGSDVQIDLNVEHHYEEDIVPNMTRLPRVKYITYYEDSESLPGMRTAVWELDKANHRNIVRSSVLMRELWLEMWRDIHPDAKSEFVTKAKRGPLRDEDCYWDYGKARCAWPDYCEYRYVFGDVHLGQSCRLRYTAAELLLHYL* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3332 642 Pfam Lecithin:cholesterol acyltransferase 76 512 IPR003386 GO:0006629|GO:0008374
Tpr6g3332 642 Gene3D alpha/beta hydrolase 106 264 IPR029058 -
Tpr6g3332 642 PANTHER BNAA09G50730D PROTEIN 37 625 - -
Tpr6g3332 642 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 37 625 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3332 19 642 Acyl Lipid Metabolism Gene Families AT1G04010 76.630 0.0 1030
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3332 - - gmx:100806466 1214.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3332 6 35947145 35961398 Tpr6g3332 6 35947145 35961398 ECH