Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3329 ATGGAGGGTACAAAAAGATCACACGAAGCAGGTCCATCTTCTGTCATAATTGACAAAACCAAACAACAAACCACTGAAAAATCCACTCACACTTTTCATGATAGTAGTAGTGATGACGATGAAGAACAAATCATTGATCATAGTAAAAACAGTGTCTTTGTTCCTGGTCCTCTTCTTTCTCTCAAGGAACAGATCGAAAAGGACAAGGAGGATGAAAGTCTAAGGAGGTGGAAGGAGAAGCTCTTAGGTTGCTTAGAAAGTGATTTAGATGGTCAATTGGATCCTGAAGTAAAATTCCACTCCATTGGAATTCTCTCTGAGGATTTCGGTGAAATCGTTACTCCTTTACCTGTGGAAGAAAATCAGAACGGCCGTACGCTATTCACTCTAAGGGAGGGATCTCGCTATCAGCTTAAGCTACAATTTAGTGTTATGCACAACCTTGTTTCTGGCTTGACTTACTCCAACACTGTGTGGAAAGGAGGGCTTCAAGTTGATCAGAGCAAAGGAATGTTGGGTACTTTTGCTCCCCAAAAGGAGCCATATGTATATGCCTTGAAAGAGGACACAACTCCCTCTGGTGCACTTGCAAGGGGTGTTTACTCGGCAAAACTTAAGTTTGAAGATGATGACAAAAGGTGTCATATGGAACTCAAATATTTGTTCGAGATTATAAAAAGCGGCTAG 687 0.4119 MEGTKRSHEAGPSSVIIDKTKQQTTEKSTHTFHDSSSDDDEEQIIDHSKNSVFVPGPLLSLKEQIEKDKEDESLRRWKEKLLGCLESDLDGQLDPEVKFHSIGILSEDFGEIVTPLPVEENQNGRTLFTLREGSRYQLKLQFSVMHNLVSGLTYSNTVWKGGLQVDQSKGMLGTFAPQKEPYVYALKEDTTPSGALARGVYSAKLKFEDDDKRCHMELKYLFEIIKSG* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3329 228 MobiDBLite consensus disorder prediction 23 47 - -
Tpr6g3329 228 Gene3D Coagulation Factor XIII, subunit A, domain 1 52 227 IPR024792 -
Tpr6g3329 228 MobiDBLite consensus disorder prediction 1 49 - -
Tpr6g3329 228 Pfam RHO protein GDP dissociation inhibitor 42 226 IPR000406 GO:0005094|GO:0005737
Tpr6g3329 228 SUPERFAMILY E set domains 47 227 IPR014756 -
Tpr6g3329 228 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1-LIKE 1 226 - -
Tpr6g3329 228 PANTHER RHO GDP-DISSOCIATION INHIBITOR 1 226 IPR000406 GO:0005094|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3329 Tpr-Chr6 35903900 35908579 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3329 K12462 - gmx:100810029 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3329 6 35903900 35908579 Tpr6g3329 6 35903900 35908579 ECH