Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3325 ATGGAAGATTGTCATCCTCTATTGAGAGGTGGTAGAAGAAAAGAGAAAGGTTATAGTCATGGATTATCAACTACTCAGATGCATGTTATGGCTACCATTTGTGATACCCTTTTTCCTTCTCTTCCATTGAACAAAGAAATTTCACAAGATGGAGTTCTTTCATCTTTCTACTCAACTTCTGGTTCTCAATTCCCATTTCCTGATGAGGCTGCAGAACTATTGTTAGTATTCAAGAGGAGTGTACCAGAAGCATATCCTTTGGTGAGGTGGATTCTATGGCTTCTGTCTTTCAAATTAGGGACACTGTTTCTTTGTACAACTCATTGCTTGCATTGGAAGTGGCCTTTTGTTCTCAAATTTTCTGAGATTTCTTTGGAAAAGAGAGAAGAAATTCTGAAGAAATGGTCAAAGGAGAACAGTTGGGTACCTCTAAGGGTGCTGTTTGTGGTGATGAAACTTATTTTCTTCTATACTTTGTTCACAAGGACAGATGTAAATGGCCATAATCCAATGTGGAAAGCAATAGGGTACAAGGTGGACACCAGGGAAAAGTTGAAACCAAAGAAGAGGCCCCTCCAGGAAGGAGTAATAGAGACAGCATACGAAACTAATTCTACTTTAATCCAATCCCTGAGTGAAAAAGGCCTTGAAGTCACTGAAGATGAAGAGAAGAACGTGTACAAGATCAAATGCGATGTTGTCATTGTCGGTTCTGGTAGCGGTGGAGGAGTTGCAGCTGCAATTCTTGCAAACTCAGGTTATAAAGTGATCGTCCTAGAGAAAGGAGAGTATTTTGTTTCTCAAGATTATTCTTCCTTGGAAGGTGTGTCGATGAACCAGCTATATGAATCAGGCGGAATCTTGCCGACACATGACGGTAAAATGATGATCTTAGCTGGCTCAACATTAGGTGGAGGTTCAGCTGTAAACTGGGCTGCATGTGTCAGAACACCTGATTCTGTTATGAAGGAATGGTCTGAAAAATATAAACTACCGCTTTTCGCAACCTCTGATTATCGATTTGCTATGGACGCGGTATGTAGAAGGATTGGTGTCACAGATAAATGCAACAAGGAGAGTTTTCAAAATCAAGTTCTTCGAAAAGGGTGTGAGAGAATCGGTTTAAAAGTTGAATCAGTTACAGTGAATGCTTCAGAAGACCATTATTGTGGTTCATGCTGTTACGGTTGTAGATCAGGTGATAAAAAAGGTACTGACTCGACTTGGTTGGTTGATGCTGTACAAAACGGTGCAGTTATCCTCACTGGATGTAAAGCTGAGAAATTCATACTGAAAGATGGAAATAATGGAACAAAGAGAAAAAATTGTTCAGGCGTGATTGCTGCAACAAGTTGGAGGAGTATGATAACAAATAAACTTCAAATAGAATCAAAGGTAACTATTTCATCATGTGGATCACTACTTACACCTCCTCTAATGATTTCTAGTGGACTAAAAAATCCAAACATTGGCAAGCATCTTCATCTCCATCCTGTTCAATTTGCTTGGGGCTATTTCCCGGAAGACGAAAACTTGAGCGGTAGTAACTATGAAGGAGGAATCATAACTTCTATACACAAAGTACTTGCTGAAAATTCCACACCAAAAATCATTATAGAAGCACCTGCTCTAGGACCTGGATCATTTTCAGCATTGGTTCCATGGAACTCGGGGATTGATATGAAAGATAGATTGGCGAAATATTCAAGAACTGCTAGCCTTTTTGCATTGGTTAGAGACAAAGGATCAGGAGAAGTAAAACGTGAAGGAAGAGTTTCTTATAGACTTGATCAAACGGACAAAGAAAACCTTAGAATTGGATTAAGGAAGGCTTTAAGGATATTGGCTGCGGCGGGAGCTGAAGAAGTTGGAACTTATAGAAGTGATGGACAAAGAATCAAATGTAAAGGGATCAAAGAAGAAGATTTTGAGGAGTTTCTAGATACGGTTACGGTTGTTGGGGGTCCGCAGTCCCGAGGTGAACTATGGAATGTGTTTAGTTCAGCTCATCAAATGGGAAGTTGCAGAATGGGTGGCAATGAAGAAGAGGGTGCAGTTGATGAGAATGGAGAATGTTGGGAAGCAAAAGGTTTGTATGTATGTGATGGAAGTGTTTTACCTAGTGCAGTTGGTGTTAATCCAATGGTAACCATTCAATCTACAGCATATTGTATTGCTAGTAAAATTGCAGAATCACTTAAGAAAAAGTAG 2211 0.3976 MEDCHPLLRGGRRKEKGYSHGLSTTQMHVMATICDTLFPSLPLNKEISQDGVLSSFYSTSGSQFPFPDEAAELLLVFKRSVPEAYPLVRWILWLLSFKLGTLFLCTTHCLHWKWPFVLKFSEISLEKREEILKKWSKENSWVPLRVLFVVMKLIFFYTLFTRTDVNGHNPMWKAIGYKVDTREKLKPKKRPLQEGVIETAYETNSTLIQSLSEKGLEVTEDEEKNVYKIKCDVVIVGSGSGGGVAAAILANSGYKVIVLEKGEYFVSQDYSSLEGVSMNQLYESGGILPTHDGKMMILAGSTLGGGSAVNWAACVRTPDSVMKEWSEKYKLPLFATSDYRFAMDAVCRRIGVTDKCNKESFQNQVLRKGCERIGLKVESVTVNASEDHYCGSCCYGCRSGDKKGTDSTWLVDAVQNGAVILTGCKAEKFILKDGNNGTKRKNCSGVIAATSWRSMITNKLQIESKVTISSCGSLLTPPLMISSGLKNPNIGKHLHLHPVQFAWGYFPEDENLSGSNYEGGIITSIHKVLAENSTPKIIIEAPALGPGSFSALVPWNSGIDMKDRLAKYSRTASLFALVRDKGSGEVKREGRVSYRLDQTDKENLRIGLRKALRILAAAGAEEVGTYRSDGQRIKCKGIKEEDFEEFLDTVTVVGGPQSRGELWNVFSSAHQMGSCRMGGNEEEGAVDENGECWEAKGLYVCDGSVLPSAVGVNPMVTIQSTAYCIASKIAESLKKK* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3325 736 Gene3D - 215 528 IPR036188 -
Tpr6g3325 736 PANTHER LONG-CHAIN-ALCOHOL OXIDASE FAO4B 2 735 - -
Tpr6g3325 736 SUPERFAMILY FAD/NAD(P)-binding domain 229 735 IPR036188 -
Tpr6g3325 736 PIRSF Lg_Ch_AO 8 736 IPR012400 GO:0046577
Tpr6g3325 736 Pfam GMC oxidoreductase 232 499 IPR000172 GO:0016614|GO:0050660
Tpr6g3325 736 Gene3D - 631 733 IPR036188 -
Tpr6g3325 736 Pfam GMC oxidoreductase 591 724 IPR007867 GO:0016614
Tpr6g3325 736 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 2 735 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3325 Tpr-Chr6 35854908 35858890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3325 5 736 Acyl Lipid Metabolism Gene Families AT4G28570 57.335 0.0 829
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3325 K17756 - gmx:100808951 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3325 6 35854908 35858890 Tpr6g3325 6 35854908 35858890 ECH