Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3324 ATGGCAGCAAGCGCAGGTCTATACCGGAGAACCCTTCCTCCTCCTTCAATCGAGTTCGCTTCGCCGGAAGGCAAACAAATCTTTACGGAAGCTCTTCGGAATGGAACAATGGAAGGTTTCTTCAAATTAATTTCATACTATCAGACTCAATCAGATCCTGCTTTTTGTGGTTTAGCTACTCTTTCTGTTGTTCTCAATGCTCTTGCTATTGACCCTGGTAGAAAATGGAAAGGTCCTTGGAGATGGTTTGATGATTCCATGTTGGATTGCTGTGAGCCTTTGGACAAGATTAAATCACAAGGCATTACATTTGGAAAAGTTGAGTGCTTGGCTCGATGCAATGGAGCTAAAGTTGAAGCCTTTCGATCGGATCAGAGCAACATTGATGATTTCCGCAACCGTGTGATTTCCTGTTCTTCTTCTGAGGATTGCCATGTCATTGTGTCTTATCAAAGGACTCAACTCAATCAGACTGGGATTGGGCATTTTTCACCTCTTGGAGGATACCATGCTGAAAGGGATATGGCCCTTATATTGGATGTTGCTCGATTCAAATATCCTCCTCACTGGGTTCCTGTTACCTTTCTTTGGAATGCACTGAATACCATCGATCAAGAAACTGGACAACATAGGGGGTACATGATTATTTCAAAGCTTAACAGGGCACCATCAATACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAGCAGTGTTGCCAAATATCTAACTGAAGACGTCCCTCTTCTTCTAAAATCTGAGGATCTAAAGGACATTCAGGAAGTATTCTCTGTTGTATTTAAATCTCCTCCTAGTGAATTGAGAGAGTTTATCACTTGGATTGCTGAGGTTCGCAGGCAAGAAGATGGGAATCTCACTTTGAGCGAGGAGGAGAAAGGAAGGCTGGCTATCAAGGCAGATGTACTGGAACAAATTCGATCAACCGCGCTCTTCAAACATGTGACCAGGTGGTTGGATTCAGAAAGGTCATGTTGCGATACCATTGCAAGCTTTGGTGAGAAAGATAAGTTATCAGCACTTGCGGCACGTGTTTGCTGCCAAGGAGCAGATCTCTTGTCTGGTTGTCGTGTATCAGGTGCAAAATGCTGTAGCCAAATAGATGTAAAGCATCTGAATGTTGATAGTGAAAATCCAGTAACATTGTTTTCCGGAACCTTTACAACTGGGGGCAGTAGTGAACAAGGAGTTGATATGTTGGTCCCTTTGTGTCAAAGGAAGCCAAATAGTTTGTGTCTTTGTAATGAAGGTCAGTGCATTGGCATGCACCCATCTACTGCAGATGTCTTGACAGTGCTTTTATTTGCCTTGCCGTTGCATACATGGTCAAGCATCAAAGAAGAAAAGCTGCGTGTGGAAGCTGCAAGCCTTCTAACAACCAAAGATCTCCTTCCCTTACTTTCGGAAGAGGTTTTGTTTTTGCGAGAGCAACTTCACTCTCTCATGACTGATAATGGTGCTCCTTCTAACTGA 1491 0.4319 MAASAGLYRRTLPPPSIEFASPEGKQIFTEALRNGTMEGFFKLISYYQTQSDPAFCGLATLSVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLDKIKSQGITFGKVECLARCNGAKVEAFRSDQSNIDDFRNRVISCSSSEDCHVIVSYQRTQLNQTGIGHFSPLGGYHAERDMALILDVARFKYPPHWVPVTFLWNALNTIDQETGQHRGYMIISKLNRAPSILYTVSCRHEGWSSVAKYLTEDVPLLLKSEDLKDIQEVFSVVFKSPPSELREFITWIAEVRRQEDGNLTLSEEEKGRLAIKADVLEQIRSTALFKHVTRWLDSERSCCDTIASFGEKDKLSALAARVCCQGADLLSGCRVSGAKCCSQIDVKHLNVDSENPVTLFSGTFTTGGSSEQGVDMLVPLCQRKPNSLCLCNEGQCIGMHPSTADVLTVLLFALPLHTWSSIKEEKLRVEAASLLTTKDLLPLLSEEVLFLREQLHSLMTDNGAPSN* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3324 496 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 2 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3324 496 SUPERFAMILY Cysteine proteinases 12 217 IPR038765 -
Tpr6g3324 496 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 491 IPR040409 GO:0016756|GO:0046872|GO:0046938
Tpr6g3324 496 Pfam Domain of unknown function (DUF1984) 231 484 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3324 496 Pfam Phytochelatin synthase 8 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3324 496 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 6 491 - -
Tpr6g3324 496 Gene3D - 16 221 IPR038156 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3324 Tpr-Chr6 35843568 35849297 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3324 K05941 - gmx:100782042 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3324 6 35843568 35849297 Tpr6g3324 6 35843568 35849297 ECH