Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3323 ATGGCGATGGCCGGTTTGTATCGCCGCCTTCTTCCTTCTCCACCTTCCGTTGATTTTGCTTCTTCTCATGGCAAGCAACTTTTTCTTGAAGCAATTCAAAACGGAACAATGGAAAATTTTTATAGATTGGTCTCTTATTTTCAAACTCAATCTGAACCTGCTTTCTGTGGACTCGCCAGTCTCTCCATGGTTCTCAATGCTCTCGCCATTGATCCTGGTAGGAAATGGAAAGGACCTTGGAGATGGTTTGATGAATCCATGTTGGACTGTTGCGAACCTTTAGAAACAGTCAAAGCCAGAGGTATCTCATTTGGGAAACTAGTATGCTTAGCTCATTGTGCTGGAGCAAAAGTTGACGCCTTTCATGCAAGTCAGAGCAGCATAAATGATTTTCGTAAATATGTCATTAAGTGTTCAACTTCTGATGACTGTCATGTAATCTCATCATACCACAGAGCTGCTCTCAAACAAACGGGAACCGGTCACTTTTCTCCTATTGGAGGCTATCATATTGGAAAGGATATGGCACTAATTTTGGATGTTGCACGTTTTAAGTATCCTCCCCACTGGGTTCCACTTAAACTTCTTTGGGAAGGCATGAATTATGTTGATGAATCCACTGGACAATCCCGGGGGTTCATGCTTATATCGAGGCCGCATAGGGAACCTGGCATGCTTTATACTCTGAGTTGCAAACACGAGAGTTGGAATAGTATTGCGAAATTCTTAATGGATGATGTCCCTGTTCTATTAAAATCAGAGGACGTGAAAGACATTCATAAGGTTCTTTCAGTTATCTTCACATCACTGCCATCTAATTTTGAAGAATTCATCAAATGGGTTGCAGAGATCAGGAGACGAGAAGATGGCGATTCAAGTCTAAGTGCAGAGGAGAAAACAAGGCTCGCTGTCAAGGAAGAGGTATTGCAACAGGTGCAGGAAACTATGCTTTTCAAACACGTGTCCTCTTTTCTGTCAAGTTCTTGTGGCAGACAAACAGTTACTTCAGGTGATGGTGACACCTTACCTGTCATTGCTGCAAGTGTTTGTTGCCAAGGAGCAGAAATTTTAGATGGAAAACTTAGCTCACCGGCGGCAGCATATTGCTGTCCAGAAACATGTACAAAATGCTGGAAAGCTGAAGATGATAAATCAATAACAATGGTTAGTGGGACTGTGGTAAATGGTAACACTGAGCAAGGGGTTGATGTTTTTATTCCTTCATCTGGGAAATTATGTTGCACTTGCTCGAGTAAAAAGAACATTAGTATGCACCCAGCTAGCACTGATGTGCTAACAGTGCTTATTCTGTCCTTACCATCTACAACATGGGCTGGCATCACCGATGAGAAGCTTTTGAGGGAAATACATGACTTGGTATCAACTGAAAATCTTTCTACTTTGCTTCAACAAGAGGTTCTGCACTTAAGAAATCAGCTACATATTCTGAAGAGATGTCAGGAGGGCAAGGTAGATCAGGATCTCGGTGCTCCTTCCTCTTAG 1503 0.4232 MAMAGLYRRLLPSPPSVDFASSHGKQLFLEAIQNGTMENFYRLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLETVKARGISFGKLVCLAHCAGAKVDAFHASQSSINDFRKYVIKCSTSDDCHVISSYHRAALKQTGTGHFSPIGGYHIGKDMALILDVARFKYPPHWVPLKLLWEGMNYVDESTGQSRGFMLISRPHREPGMLYTLSCKHESWNSIAKFLMDDVPVLLKSEDVKDIHKVLSVIFTSLPSNFEEFIKWVAEIRRREDGDSSLSAEEKTRLAVKEEVLQQVQETMLFKHVSSFLSSSCGRQTVTSGDGDTLPVIAASVCCQGAEILDGKLSSPAAAYCCPETCTKCWKAEDDKSITMVSGTVVNGNTEQGVDVFIPSSGKLCCTCSSKKNISMHPASTDVLTVLILSLPSTTWAGITDEKLLREIHDLVSTENLSTLLQQEVLHLRNQLHILKRCQEGKVDQDLGAPSS* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3323 500 Pfam Domain of unknown function (DUF1984) 231 480 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3323 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 493 - -
Tpr6g3323 500 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3323 500 Pfam Phytochelatin synthase 7 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Tpr6g3323 500 Gene3D - 16 220 IPR038156 -
Tpr6g3323 500 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 3 493 IPR040409 GO:0016756|GO:0046872|GO:0046938
Tpr6g3323 500 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3323 Tpr-Chr6 35837699 35842046 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3323 K05941 - gmx:547627 873.618