Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3321 ATGAACATCTTCACCAAGAAACCCACCGCCAAAGAGGCTCTTCGCGAGAGTAAACGCGAAATGACAAACGCCACTAGAGGTATAGAGAGGGAAATTGGATCATTACAATTAGAAGAAAAGAAACTTGTTGCTGAGATTAAGAGAACTGCTAAAACAGGAAATGAGGGAGCGACTAAAATTCTAGCACGTCAGTTGATAAGGCTGAGGCAACAGATTGCTAATCTTCAAGGTAGTCGAGCTCAGATGAGAGGCATAGCAACTCACACACAGGCTATGCACGCTCATTCTTCTGTTGCTGTTGGAATGAAAGGTGCTACTAAGGCAATGGCAGCTATGAATAAGCAAATGGAACCCGCAAAGCAAGCCAAAATTATGCAGGAATTCCAGAAACAATCGGCACAAATGGATATGACTACTGAAATGATGTCAGATGTCATAGATGATGCCTTGGATGATGATGAAGCTGAAGAGGAGACTGAAGAGCTCACAAATCAAGTGCTTGATGAAATCGGTGTGGATATTGCCTCACAGTTATCAGCAGCTCCCAAAGGAAGAGTCGCAACAAAAAATACTGAAAATGTCGGCAGCTCGGGCATTGATGACCTTGAGAAGCGTTTGGCGGCTCTGAGAAATCCATAA 639 0.4366 MNIFTKKPTAKEALRESKREMTNATRGIEREIGSLQLEEKKLVAEIKRTAKTGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMHAHSSVAVGMKGATKAMAAMNKQMEPAKQAKIMQEFQKQSAQMDMTTEMMSDVIDDALDDDEAEEETEELTNQVLDEIGVDIASQLSAAPKGRVATKNTENVGSSGIDDLEKRLAALRNP* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3321 212 Pfam Snf7 16 185 IPR005024 GO:0007034
Tpr6g3321 212 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2 HOMOLOG 3 2 212 - -
Tpr6g3321 212 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 2 212 IPR005024 GO:0007034
Tpr6g3321 212 MobiDBLite consensus disorder prediction 1 22 - -
Tpr6g3321 212 Gene3D - 4 181 - -
Tpr6g3321 212 MobiDBLite consensus disorder prediction 183 197 - -
Tpr6g3321 212 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3321 Tpr-Chr6 35826884 35830737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3321 K12192 - gmx:100306343 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3321 6 35826884 35830737 Tpr6g3321 6 35826884 35830737 ECH