Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3317 ATGGCCACAATCCTTGCAAAATTTCTCCTCCTGCTTTTCACTATTTCGATCTGCAACGCCGTCACCATTCCAACTCCAATCTCCGATTCTCATCGTTCCGCTGCTTTACAACTCTTCCATGGATCTTCTTCAAGTTTAGAAGAAACATATGAGGCTCTAAGAGTTTTTGAGATTCTTGCCCTTGAGAATAAGCCTGATGTGAGCTCAGCCACTTGTCAGAATGTAGTGGAAAATCTTGGGTCGTCGTCTTCTTTAAAGGATTTGTTCTATGCCTTAAAGGTCAATGGCATATTGAAATGCAAAGTTGATAGGGCTGTTTTCCAGGGTACTGCTTCAAGACTTAAAGCTACCGTCAATGATGCAAGTACTTTGGTTGACATCTACTATACAATAGGAAGTTTGGTTCTTATAAAGGATCAGGCACCTAATGTTGATGTGCTTCTTGCTGATGCTGATGGGACTTTCCATTCAATCAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGCTACAGTTCTGATAATCCTGAGTCGAGTACCTACGCTGCTGGATTAGCACTTGAAGCACTGGCTGGAGTCATCTCACTAGCATCTTCGGAAATTGATCAATCTAGGGTAAATACAGTGAAAAGTGATATATTGAAGCTTTTTGACAGCATCCAGAAATATGACGATGGAACATTTTATTTTGATGAGAAATTTGGCGGTGGCCGTGAGCATCAGGGTTCTCTTTCCACAACTTCTTCAGTTGTTCGAGGGGTTACATCATTTGCTGCTGTAACTTCTGGAAAAATAGATCTTCCAGGGGATAAAGTATTGGGTTTAGCAAAATTCTTTTTAGGCATTGGAGTCCCAGGAAGTGCCAAGGACTTCTTCAATCAAGTTGAATCATTAGCTCTTCTGGAGAGCAAAAGGGTTCCCATCCCATTGGTGCTGTCACTTCCTGCAACAGTTTATTCATTGTCCAAAAAAGATCAACTCAAGGTTACAGTGAATACAGTACTTGGTTCAGCCGCACCACCTCTAACAGTTAAGCTTGTCCGAGCTTTCCACACTGATGCCAAAGGTTCGGCTGTTATTGAGGGCAAGGAGCTCCAGTACGATCAAAGTAGTGGACTTCATGTCTTGAGTGTTTTCCCAGATAATGTGGATGTGGGAACATATGTGTTTGTTTTTGAGATTGTGCTTCATGATTCTGGTAGTGAAAATGATTATGCTATCGGAGGCCAAATTCGTGTGCCAATATATGTCACCGGCATTGTTAAAGTTAGCAACGCAGAAATTGCAGTTCTTGACAGTGATCTTGGAAGTGATGAAACCCAGAAAACGCTAGATTTGGCTGGAACTGATGTTGTTTCACTCTCAGCTAACCACCTTCAAAAGTTGCGTTTTTCTTTCCAGTTGACAACGCCTCATGGCCGTGCTTTTAAGCCGCGTCAGGTGTTGCTTAAGTTGAGGCATGAGACAAAATATGAACACATCTTTGTGGTTCGAAATACCGGCAAGAAGTTTGAGATTATTCTTGATTTTCTTGGCTTGGTGGACAAGTTTTATTATCTCTCAGGCAGATATGATTTTGAGCTTACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACGGCCACTTGGTCATTTAGAATTAGATCTTCCAGAAGCACCCGAGAAGGCAGCACGCCTTCCTCCGCTACCTGTTGATCCTTACTCAAGATATGGGCCTAAAGCAGAGATAGGTCACTTGTTTAGGGCTCCTGAAAAGCGACCACCCCAGAATGTCTCTCTTGCTTTCTTGATTTTGACCCTTTTGCCATTCATTGGCTTTTTGGTTGGGCTATTGCGCCTGGGGGTGAACTTCAAGAACTTCCCTTCTTCAGCAGTACCCGCTACATATGCCATCCTATTCCAACTTGGTGTTGCTGCAGTTCTATTGCTTTACGTACTTTTCTGGTTGAAGCTGGACTTGTTCACTACACTCAAAGCATTAGGGTTTTTGGGAGCTTTTCTGTTGTTTGTGGGACATAGAATACTTTCCCATCTCGGTTCAACATCAGCTAAGCTGAAGTCTGCATGA 2067 0.4286 MATILAKFLLLLFTISICNAVTIPTPISDSHRSAALQLFHGSSSSLEETYEALRVFEILALENKPDVSSATCQNVVENLGSSSSLKDLFYALKVNGILKCKVDRAVFQGTASRLKATVNDASTLVDIYYTIGSLVLIKDQAPNVDVLLADADGTFHSIKALSQSDGRWRYSSDNPESSTYAAGLALEALAGVISLASSEIDQSRVNTVKSDILKLFDSIQKYDDGTFYFDEKFGGGREHQGSLSTTSSVVRGVTSFAAVTSGKIDLPGDKVLGLAKFFLGIGVPGSAKDFFNQVESLALLESKRVPIPLVLSLPATVYSLSKKDQLKVTVNTVLGSAAPPLTVKLVRAFHTDAKGSAVIEGKELQYDQSSGLHVLSVFPDNVDVGTYVFVFEIVLHDSGSENDYAIGGQIRVPIYVTGIVKVSNAEIAVLDSDLGSDETQKTLDLAGTDVVSLSANHLQKLRFSFQLTTPHGRAFKPRQVLLKLRHETKYEHIFVVRNTGKKFEIILDFLGLVDKFYYLSGRYDFELTVGDAVMENSFLRPLGHLELDLPEAPEKAARLPPLPVDPYSRYGPKAEIGHLFRAPEKRPPQNVSLAFLILTLLPFIGFLVGLLRLGVNFKNFPSSAVPATYAILFQLGVAAVLLLYVLFWLKLDLFTTLKALGFLGAFLLFVGHRILSHLGSTSAKLKSA* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3317 688 PANTHER RIBOPHORIN II 1 688 IPR008814 GO:0006487|GO:0008250|GO:0016021
Tpr6g3317 688 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 116 230 IPR008930 -
Tpr6g3317 688 Pfam Oligosaccharyltransferase subunit Ribophorin II 9 678 IPR008814 GO:0006487|GO:0008250|GO:0016021
Tpr6g3317 688 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 2 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3317 Tpr-Chr6 35796610 35805251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3317 K12667 - gmx:100806815 1102.43