Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3313 ATGGGTTCTCTACCGGCATTTCCAAACGACCATTCTCCCAAACAAACCATCAACGGTCTAATTGACGAAACTACCCTCATCGATCTCTTCAAATCTCAACAAAACCACCTCAACTTCTTCTTCGACCGCATCGACCATTCCCAAACCCTAGCATTCACACGCGCTCTCCTCAACTCCACCGGCACCGTTTTCTTCACCGGAGTCGGCAAATCCGGCTTCGTCGCTCACAAAATCTCTCAAACACTCGTCTCTCTCGGCATCCGTTCATCTTTCCTCTCCCCCGTCGACGCTCTCCACGGCGATATCGGAATCCTCAGTGATCGCGATGTACTCGTTCTCCTCAGCAAATCTGGCGCCACCGAGGAGCTTCTGCGTCTTGTTCCATGCGCTAGAGCTAAAGGTGCGATGCTTATCGCTGTTACCTCCGTTGAAGGTAACGCACTTTCGACGGTGTGTGATATGACCGTGCATTTGCCGTTGGAGAGAGAGCTTTGTCCTTTTAACCTTGCGCCGGTTACTTCTACTGCGATTCAAATGGTTTTTGGTGATACCGTTGCAATTGCGCTCATGGCTGCACGGAATCTCACTAAGGATGAATACGCCGCTAATCATCCCGCCGGTAAAATCGGAAAGAGCCTCATCTTTAAGGTAAGAGATGTGATGAAGAAGGATGAGGAGCTTCCAATTTGTAAGGAATCTGATTTGATTATGGATCAGCTTGTGGAGCTGACAAGTAAAGGATGTGGATGCTTGCTTGTTATAGACGGTGATCGCCGTCTGATTGGGACATTTACCGATGGTGATCTGCGTCGTACTCTCAAAGCTAGTGGTGAAGCAATTTTCAAACTCACTGTAGGGAAAATGTGCAACAGGAATCCGAGAACTATTGGTCCAGAGGCTATGGCAGTGGATGCCATGAAGAAGATGGAAGCACCTCCATCACCAGTCCAATTTTTGCCTGTGATAGATGATGACAATGTCGTGATTGGGATTGTCACGTTACATGGTTTGGTTTCAGCTGGGTTATGA 1029 0.483 MGSLPAFPNDHSPKQTINGLIDETTLIDLFKSQQNHLNFFFDRIDHSQTLAFTRALLNSTGTVFFTGVGKSGFVAHKISQTLVSLGIRSSFLSPVDALHGDIGILSDRDVLVLLSKSGATEELLRLVPCARAKGAMLIAVTSVEGNALSTVCDMTVHLPLERELCPFNLAPVTSTAIQMVFGDTVAIALMAARNLTKDEYAANHPAGKIGKSLIFKVRDVMKKDEELPICKESDLIMDQLVELTSKGCGCLLVIDGDRRLIGTFTDGDLRRTLKASGEAIFKLTVGKMCNRNPRTIGPEAMAVDAMKKMEAPPSPVQFLPVIDDDNVVIGIVTLHGLVSAGL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3313 342 ProSiteProfiles SIS domain profile. 52 195 IPR001347 GO:0097367|GO:1901135
Tpr6g3313 342 ProSiteProfiles CBS domain profile. 221 280 IPR000644 -
Tpr6g3313 342 PANTHER - 1 342 - -
Tpr6g3313 342 Gene3D - 23 211 - -
Tpr6g3313 342 TIGRFAM kpsF: sugar isomerase, KpsF/GutQ family 61 332 IPR004800 GO:0005975|GO:0016853
Tpr6g3313 342 Gene3D - 212 340 IPR046342 -
Tpr6g3313 342 ProSiteProfiles CBS domain profile. 289 342 IPR000644 -
Tpr6g3313 342 CDD CBS_pair_SIS_assoc 213 338 - -
Tpr6g3313 342 PIRSF KdsD_KpsF 11 342 IPR004800 GO:0005975|GO:0016853
Tpr6g3313 342 CDD SIS_Kpsf 61 188 IPR035474 -
Tpr6g3313 342 SUPERFAMILY SIS domain 28 341 IPR046348 GO:0097367|GO:1901135
Tpr6g3313 342 Pfam SIS domain 57 187 IPR001347 GO:0097367|GO:1901135
Tpr6g3313 342 SMART cbs_1 292 342 IPR000644 -
Tpr6g3313 342 SMART cbs_1 226 274 IPR000644 -
Tpr6g3313 342 Pfam CBS domain 285 340 IPR000644 -
Tpr6g3313 342 Pfam CBS domain 217 274 IPR000644 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3313 K06041 - gmx:100805755 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3313 6 35700848 35703259 Tpr6g3313 6 35700848 35703259 ECH