Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3302 ATGTCCTGCATAAGTTTAAGGCTTCCACCTGCTAGAAAGGTATGGAAAAGCTTCACTTCAAAACTTGGTAGTAAACTTCACAACATTCGTAAATCCAAAACCATGAAAAAACAAAGAAAACATCAAAACACCAAAACTATAAAACCATCTACTACTTGTATCACTGCCAAACCACCTAAGTTTCATGCAACTAAGCGTTTTCGCCGAAAAAGGTTTGCAACTGTTAGAAGTGTATTCTGCAGCTTCAACAAAAAGCCTGCACCTGTTTATATTGATAAGCTCTTTAAAGAACCTCCTTGTGATGTAGTAGGGTATTTGAAGCCAGAGACACCAAATTACAGACCAAGAATCGAAATAGCTGCGAAGATCGATGATTATCCGAGAGGGAAGAAAGAAGTGGCAGAAGGATCAACAAGCAAGAGATCATGTGAGAAAACCAGTTCATCATCAGATGATATGTGGGAGTCAGTGGCATTAGCTTCACCTCAAATGCAAGGAATTGATGAAAGAGCAGAGGAGTTTATTAACAGGTTTAGACGGCAGATGGCGGCGCAGGAGAGATTAGCTAGGAATTTGTAG 579 0.399 MSCISLRLPPARKVWKSFTSKLGSKLHNIRKSKTMKKQRKHQNTKTIKPSTTCITAKPPKFHATKRFRRKRFATVRSVFCSFNKKPAPVYIDKLFKEPPCDVVGYLKPETPNYRPRIEIAAKIDDYPRGKKEVAEGSTSKRSCEKTSSSSDDMWESVALASPQMQGIDERAEEFINRFRRQMAAQERLARNL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3302 192 Pfam Cotton fibre expressed protein 166 185 IPR008480 -
Tpr6g3302 192 MobiDBLite consensus disorder prediction 132 152 - -
Tpr6g3302 192 PANTHER DUF761 DOMAIN PROTEIN 1 192 - -
Tpr6g3302 192 Coils Coil 175 192 - -
Tpr6g3302 192 PANTHER COTTON FIBER (DUF761) 1 192 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3302 - - gmx:100500419 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3302 6 35624568 35625662 Tpr6g3302 6 35624568 35625662 ECH