Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3259 ATGGGTTCTTCTATAACACACTTACCAAACAAAATTAGCATGAATCACATTACATTCTCACAAACCTTTCAAACAACTCATCCCTTTGGTCAAGTTTCATTACCAAAGAATAACTTGTCTCCTTCTTTGAAGTCATCAATTGTTGCATCAAATTCAGCTTTACTAGAAATCACCCTTCCTACCAACACCAATACTTACACTAATACTATTAGCACCCCCACTATTTCTAAACAAACACACAAAATCACACATAAATTTTTTACTACTACTACTAGTACTAATATTGCTACAAAAAATCTAGCAAATATTTGGAGAGAGATTCAAGGGTGCAATAACTGGGAAAATCTTTTAGACCCATTACACCCTATTCTTCGCGAAGAGATAATTCGCTATGGAGAGTTTGTTACATCTTCTTACAAAGCTTTTGATCTTGATCAAAACTCGAAACGATACTTGTATTGTAAGTATGGTAAGAAGAGTATGTTGAAAGAAGTTGGAATGGAAAATTGTGGCTATGAAGTCACAAAATATATCTATGCAACACCACCAAACATCATAGAAAACAATTCATCTGGTCGATGGATTGGTTACGTAGCAGTTTCTTCTGACGATTCTTACAAAAAACTCGGTAGGAGAGATATAGTTGTAACTTTCCGCGGAACGGTTACAAATCAAGAATGGATTTCAAATCTCATGAGTTCATTAACACCGGCTTCACTTGATCCAAGTAATCAACTTCCAAACGTGAAAGTCGAATCCGGATTTCTCTCTTTGTATACTTCGGATGAAAGTTCTTCAAAATTTGGACTTCAAAGTTGTAGAGAACAACTTCTTAGTGAAGTATCAAGGTTGATGAACAAACATAAAGGTGAGAAGAATGTTAGTATATCCTTAGCTGGTCATAGCATGGGAAGTGCTTTAGCTATTTTACTTGCTTATGATATTTCAGAACTAGGTTTAAACAAAAAAAATAATAAAAATCATGCTAGTGTTACTGTTTTTTCATTTGGAGGACCAAGAGTTGGTAACTTAGAGTTTAAAAAAAGATGTGAAGAGTTAGGAGTGAAAGTGTTGAGAATATCAAATTGTAATGATCCAATAACTAAATTACCAGGTGTTGTGTTCAATGAAAATTTTAGGGTTTTGATAGGTGGGAGATATGAGTTTCCTTGGAGTTGTTCTTGTTATGCACATGTTGGTGTTGAACTTATGCTTGATTTTTTCAATGTTCAAAACCCTTCTTGTGTTCATGATTTGGATACTTATATTGGTCTTCTTAGATGCCCTAAAAAAAAGATTGAAGAAGTGATTCATGGTAATGATGGTGCAGTCAACAATTTGTTAGAGAAGGCAAAGATGTTTCTATTGAACTCATCAATATCACAAATGTTTGAAGAAGCTAGAAGAACAAACCACTATGATTTTCTTAGTTCAGTTTCAACGGATTTATTGTGTTCTTTGAGTGAGGAGACCACTATGATTTTTGGTCTTGTTCTTTTCTTGTGGTAA 1509 0.34 MGSSITHLPNKISMNHITFSQTFQTTHPFGQVSLPKNNLSPSLKSSIVASNSALLEITLPTNTNTYTNTISTPTISKQTHKITHKFFTTTTSTNIATKNLANIWREIQGCNNWENLLDPLHPILREEIIRYGEFVTSSYKAFDLDQNSKRYLYCKYGKKSMLKEVGMENCGYEVTKYIYATPPNIIENNSSGRWIGYVAVSSDDSYKKLGRRDIVVTFRGTVTNQEWISNLMSSLTPASLDPSNQLPNVKVESGFLSLYTSDESSSKFGLQSCREQLLSEVSRLMNKHKGEKNVSISLAGHSMGSALAILLAYDISELGLNKKNNKNHASVTVFSFGGPRVGNLEFKKRCEELGVKVLRISNCNDPITKLPGVVFNENFRVLIGGRYEFPWSCSCYAHVGVELMLDFFNVQNPSCVHDLDTYIGLLRCPKKKIEEVIHGNDGAVNNLLEKAKMFLLNSSISQMFEEARRTNHYDFLSSVSTDLLCSLSEETTMIFGLVLFLW* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3259 502 Gene3D alpha/beta hydrolase 103 466 IPR029058 -
Tpr6g3259 502 PANTHER PHOSPHOLIPASE A1-IALPHA2, CHLOROPLASTIC 67 462 - -
Tpr6g3259 502 CDD Lipase_3 172 427 - -
Tpr6g3259 502 Pfam Lipase (class 3) 215 373 IPR002921 GO:0006629
Tpr6g3259 502 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 67 462 - -
Tpr6g3259 502 SUPERFAMILY alpha/beta-Hydrolases 186 422 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3259 Tpr-Chr6 35173013 35175080 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3259 100 488 Acyl Lipid Metabolism Gene Families AT1G05800 64.824 2.08e-178 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3259 - - gmx:100820494 643.269