Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2765 ATGACTAAAAAAGCATTGCCAGTTCCAAATTTTGGTAGTGACTTTTGCATTAGTTACCATAACTCTTCATCACAAAAGATGAGAATTATTGAATTGTTACCACCCTCCAACGGCAACGGTTCTTCAAAAGAAGAAGAAGAACCTTTACCTCAGGATGCAGATTATGTATTAAGTCTCAGCGACGAGCTAGAGACTTCGATCTTGGCAAGATTTCCAAGATCATTACACTGGAAACTATGTTTTCTAAACAAGAGATTCTTGTCTCTAATGAAAAGCGGCGAAATCTACAAAATAAGGAAGGAGTTAGGACTCAAAGAACCGTCGGTTTTCATGTTAGCTAGCGGGGAAAGCAATTGGTGGGGTATGGATTGGCCTTTCAAATCAAGCAGGAAGCTTCCGAGGATTCAATCAGATTACAGCTTTGAATTTGGTGATAAAGAGTCATTCTCTGCAGGGTCACAGTTATTGGTTTCAGGCAAAGAAATCGAAGGAGCAGTTATTTGGAGGTACGATTCGGAAACTAATGAATGGTTTAAAGGGCCATTCATGATCAATCCAAGGTGTCTATTTGCTTCGGCTAGTTCTGGTAATTTCGCTTTTGTTGCCGGTGGATTAGAAACAAACACTTATAGCGAAGTATTGGATACTGCTGAGAAATATGACTCGAAAAGCAAAACTTGGAAACCGTTACCAAAGATGAATCTAAAGAGAAAATTTTGTTCTGGTTGTTACATGGATAAGAGATTCTATGTTATTGGTGGACAAGACGAGAATAAAAAGGATTTAACTTGCGGAGAGTTTTTCGACGAAAAGACAAATACATGGAACTTGATTCCTGATATGTTGAAAGATATTCCGCTTTCGGTTTCACTTTCGATTTCACAGTCTCCGCCTCTAATAGCTGTTGTTAATAATGAGCTTTACACACTCGACGCGTCTTCTAACGAGTTGAAAGTTTACATTAAAGGGATGAATAAGTGGAAGAAGTTAGGTGTTGTTCCGGTTAGAGCCGATGAACAAGGTGGTTGGGGTGTGGCATTTAAATCACTCGGTGATCAGTTACTTGTTATTGGTGCGCCTTCGGTTTCGCATAAAGAGCGTGCTTTGGCAATTTATACTTGTTCTCCTGATCCTGAAGGTGAGAGATTGAAATGGAAGCAAATTGATTGTGGAAGTGTTCAGCTTAATCATTTCATTAGGAACTGTGCTGTTATGATGGGAAGTTCTTGA 1230 0.3935 MTKKALPVPNFGSDFCISYHNSSSQKMRIIELLPPSNGNGSSKEEEEPLPQDADYVLSLSDELETSILARFPRSLHWKLCFLNKRFLSLMKSGEIYKIRKELGLKEPSVFMLASGESNWWGMDWPFKSSRKLPRIQSDYSFEFGDKESFSAGSQLLVSGKEIEGAVIWRYDSETNEWFKGPFMINPRCLFASASSGNFAFVAGGLETNTYSEVLDTAEKYDSKSKTWKPLPKMNLKRKFCSGCYMDKRFYVIGGQDENKKDLTCGEFFDEKTNTWNLIPDMLKDIPLSVSLSISQSPPLIAVVNNELYTLDASSNELKVYIKGMNKWKKLGVVPVRADEQGGWGVAFKSLGDQLLVIGAPSVSHKERALAIYTCSPDPEGERLKWKQIDCGSVQLNHFIRNCAVMMGSS* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2765 409 Pfam Kelch motif 186 234 IPR006652 GO:0005515
Tpr6g2765 409 Pfam Kelch motif 237 281 IPR006652 GO:0005515
Tpr6g2765 409 Gene3D - 114 390 IPR015915 GO:0005515
Tpr6g2765 409 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 2 406 - -
Tpr6g2765 409 SMART kelc_smart 200 247 IPR006652 GO:0005515
Tpr6g2765 409 SMART kelc_smart 248 295 IPR006652 GO:0005515
Tpr6g2765 409 SMART kelc_smart 154 197 IPR006652 GO:0005515
Tpr6g2765 409 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 2 406 - -
Tpr6g2765 409 SUPERFAMILY Kelch motif 150 360 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2765 Tpr-Chr6 30149678 30152915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2765 57 278 Miscellaneous Gene Families AT4G33900 27.753 1.01e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2765 - - gmx:100783477 634.409