LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g2756	ATGACCATGGGTCTGAAACTTCCTAAAGTAACCTCCATGCAGTCAATTTATCGTGCTGTTGTTCATGATCCTTCTTGCATATGTTGTCTGCCTCTTGCATCTAGAACTTTGTTTTCTTCCTTAGCAACTTGTCACGATGCAGAAGGTAGAGAATTTCCGCATCGAGAACAATCTCAAGACCTGACAAGATCTGTGGACATTCTTACTGCAAAAATTGGCAAAGGAAACAGCGAGGAAGATATTCTCCGGTCTCTAATCAGCGATGAAGCTGTAAATGGTATTCATCCATCTCAAAACCTTATTAACAGGTTACTTTGTCGATATAAGAATGATTGGAAGTCTGCATTGGGGATATTCAAATGGGCCAGTTTTCATTCAAACTTTAAACATTCGCAAGAATCGTATGATATGATGGTAGATATATTGGGCAGAATGAAGGTAATGGAAAAGATGGGAGAGATCTTAGAAGAAATGCGTGAGGAGAGTCTCGTCACTCTCGATACTATAGCCAAGGTAATGAGAAGGTTTGCCGGGACAAGACAGTGGAAAGATGCTGTGAGGATATTTGATGACTTACAGATTTTCGACTTGGAGAAGAATACGGAATCCATGAATGTGTTGCTTGATACTCTATGCAAAGAGAAATTTGTTGAGCAAGCTCGTGAAATTTATGTGGAGCTGAAGCATTACATTGCTCCAAACGCTCACACGTTTAACATATTTATTCATGGATGGTGCAAAATCCGACGTGTTGAGGAGGCACATTGGACAATCCAAGAGATGAAAGGATATGGTTGTCGCCCTTGTGTTATAAGTTATTCCAACATCATCCAATGTTATTGTCAAGAACAGAATTTCGACAGGGTTTACGAACTTCTCGATGAAATGCAAGCTCAAAATTGCTCCCCCAATGTGATCACTTATACTATTATCATGTGTGCGCTGGCAAAAGCAAAAAAAATCGACGAAGCTTTTCAACTCGTTGAGAGAATGAACTCTACCGGATGTAAACCTGATACACTTTTTTACAATTCGTTCATTTATGCGTTGGGGAGAGCAGGCAGAATAGACAATGCTATGCATGTTTTCAAGGTTGCGATGCCAAAGGCCGGTGTGGCCCCAAATACGTCTACATATAATTCTATGATTTCAATGTTTTGTTTCTATGCACAAGAAGAGAGAGCTTTTGGCATACTGAAGGAGATGGAAGATTCAGGTCTATATAGATGTAAGTGGGCGTTCGTTCTGTTCGAGGAGATGGTTGATCAAGATATCGTGCCTAGATACCGAACCTGCCGTTTGCTCTTGGATGAAGTCAATAGGATAAATATGTATGAAGCTGCTGAGAAAATTGAAATTCTTATGAAGAAACTTTAA	1377	0.3994	MTMGLKLPKVTSMQSIYRAVVHDPSCICCLPLASRTLFSSLATCHDAEGREFPHREQSQDLTRSVDILTAKIGKGNSEEDILRSLISDEAVNGIHPSQNLINRLLCRYKNDWKSALGIFKWASFHSNFKHSQESYDMMVDILGRMKVMEKMGEILEEMREESLVTLDTIAKVMRRFAGTRQWKDAVRIFDDLQIFDLEKNTESMNVLLDTLCKEKFVEQAREIYVELKHYIAPNAHTFNIFIHGWCKIRRVEEAHWTIQEMKGYGCRPCVISYSNIIQCYCQEQNFDRVYELLDEMQAQNCSPNVITYTIIMCALAKAKKIDEAFQLVERMNSTGCKPDTLFYNSFIYALGRAGRIDNAMHVFKVAMPKAGVAPNTSTYNSMISMFCFYAQEERAFGILKEMEDSGLYRCKWAFVLFEEMVDQDIVPRYRTCRLLLDEVNRINMYEAAEKIEILMKKL*	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g2756	458	PANTHER	OS02G0601600 PROTEIN	38	406	-	-
	Tpr6g2756	458	PANTHER	OS02G0601600 PROTEIN	409	458	-	-
	Tpr6g2756	458	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	234	268	IPR002885	-
	Tpr6g2756	458	PANTHER	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	409	458	-	-
	Tpr6g2756	458	PANTHER	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	38	406	-	-
	Tpr6g2756	458	TIGRFAM	PPR: pentatricopeptide repeat domain	343	376	IPR002885	-
	Tpr6g2756	458	TIGRFAM	PPR: pentatricopeptide repeat domain	306	340	IPR002885	-
	Tpr6g2756	458	TIGRFAM	PPR: pentatricopeptide repeat domain	236	268	IPR002885	-
	Tpr6g2756	458	TIGRFAM	PPR: pentatricopeptide repeat domain	271	305	IPR002885	-
	Tpr6g2756	458	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	375	409	IPR002885	-
	Tpr6g2756	458	Gene3D	Tetratricopeptide repeat domain	332	407	IPR011990	GO:0005515
	Tpr6g2756	458	Gene3D	Tetratricopeptide repeat domain	82	259	IPR011990	GO:0005515
	Tpr6g2756	458	Gene3D	Tetratricopeptide repeat domain	260	331	IPR011990	GO:0005515
	Tpr6g2756	458	Pfam	PPR repeat family	338	387	IPR002885	-
	Tpr6g2756	458	Pfam	PPR repeat family	268	317	IPR002885	-
	Tpr6g2756	458	Pfam	PPR repeat family	199	247	IPR002885	-
	Tpr6g2756	458	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	304	338	IPR002885	-
	Tpr6g2756	458	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	269	303	IPR002885	-
	Tpr6g2756	458	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	339	374	IPR002885	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g2756	Tpr-Chr6	30080204	30083535	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g2756	206	442	Miscellaneous Gene Families	AT4G11690	24.686	4.70e-25	106

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g2756	-		-	cam:101498834	624.78