Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2738 ATGGCCTCCTCTGCAAAAGATGATCATCCAAGATCTGTTAAAAGAGTTGCTGTTGTTGGTGCTGGGGTAAGTGGGCTTGCTGCGGCTTACAAATTGAAATCACATGGTCTAGATGTAACTGTTTTTGAAGCTGAAGGAAGAGCTGGAGGGAGGCTAAGAACTATTTCTCGAGATGGGCTAGTTTGGGATGAGGGGGCTAATACAATGACTGAAAGTGAAACAGAGGTTAAAGGTTTGATTGATGCTCTTGGACTTCAAGAAAAACAACAATATCCACTGTCACAGCATAAGCGCTATATTGTAAAAAATGGGGAACCAGTTCTGGTACCCACAAACCCTGCTGCACTACTGAAGAGCAAACTGCTTTCTGCACAATCAAAGATTCGGGTCATTTTTGAACCATTTATGTGGAAAAGAAATAACTCCTCTACTGTGCGTGATGAAAATTCCGAAGAAAGTGTTAGCAGATTCTTCGAACGCCATTTTGGGAAAGAGGTTGTGGACTATCTCATTGATCCTTTTGTTGGAGGTTCAAGTGCAGCAGATCCTGAATCTCTTTCTGCGCGCCATTCTTTCCCAGAGCTATGGAATTTGGAGAAAAGGTATGGCTCCATTATAGCAGGGGCTCTACAATCCAGCTTATTTGGCAAAAGAGGCAAAACTGTAGAAACTAAAGGTGGACCAAGAAAAAACAAGAACCAGCGTGGTTCATTTTCTTTTCAGGGTGGAATGCAGACACTGACTGATACATTGTGCAAAGAGCTTGGCAAAGATGACCTTAAATTAAATGCAAAGGTTTTGACACTAGCTTACAGTCATGATGGAAGTTCCCCATCGCAAAACTGGTCTATTACTTGTGCTTCTAACAAAAAAACACAAGAGGTTGATGCAGTAATTATAACGGCTCCTCTTGATAATGTCAAAGACATCCGGATCACGAAAAGGGGAACCCCCTTTGCACTTAATTTCCTTCCTGAGGTGACCTATTTACCACTCTCAGTCTTAATTACCACCTTTAAAAAGGAGAATGTAAAGAGACCTCTGGAGGGATTTGGAGTTCTTGTCCCTTCAAAAGAGGAACAAAACGGTTTTAAAACCCTTGGTACACTTTTTTCCTCTATGATGTTTCCAGATCGAGCACCCAGTGATACGTATCTCTATACCACCTTCATAGGGGGAACTCGGAACAGGGAACTCGCTCAAGCTTCAACTGACGAGCTTAAGAATATTGTCACTTCTGACCTGAGAAAGTTGTTGGGAGCAGAGGGGGAGCCCACATTCGTCAACCATTTCTTCTGGAGTAAAGGCTTTCCTTTGTATGGTCATAACTACGGGTCAGTTCTTGAAGCAATTGACAAAATGGAAAAAGGTCTTCCTGGATTTTACTATGCAGGTAACCACAGAGGTGGACTCTCAGTTGGTAGAGCAATTGCCTCAGGTTGCAAAGCAGCTGATCTTGTAATTTCATACCTCAACAATGCTTCAGACAAAACAGTGTCTGACAAATGA 1509 0.4241 MASSAKDDHPRSVKRVAVVGAGVSGLAAAYKLKSHGLDVTVFEAEGRAGGRLRTISRDGLVWDEGANTMTESETEVKGLIDALGLQEKQQYPLSQHKRYIVKNGEPVLVPTNPAALLKSKLLSAQSKIRVIFEPFMWKRNNSSTVRDENSEESVSRFFERHFGKEVVDYLIDPFVGGSSAADPESLSARHSFPELWNLEKRYGSIIAGALQSSLFGKRGKTVETKGGPRKNKNQRGSFSFQGGMQTLTDTLCKELGKDDLKLNAKVLTLAYSHDGSSPSQNWSITCASNKKTQEVDAVIITAPLDNVKDIRITKRGTPFALNFLPEVTYLPLSVLITTFKKENVKRPLEGFGVLVPSKEEQNGFKTLGTLFSSMMFPDRAPSDTYLYTTFIGGTRNRELAQASTDELKNIVTSDLRKLLGAEGEPTFVNHFFWSKGFPLYGHNYGSVLEAIDKMEKGLPGFYYAGNHRGGLSVGRAIASGCKAADLVISYLNNASDKTVSDK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2738 502 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 492 - -
Tpr6g2738 502 Pfam Flavin containing amine oxidoreductase 23 488 IPR002937 GO:0016491
Tpr6g2738 502 PANTHER PROTOPORPHYRINOGEN OXIDASE 12 492 - -
Tpr6g2738 502 Gene3D Protoporphyrinogen oxidase, mitochondrial; domain 2 51 440 - -
Tpr6g2738 502 PRINTS Adrenodoxin reductase family signature 15 37 - -
Tpr6g2738 502 PRINTS Adrenodoxin reductase family signature 38 51 - -
Tpr6g2738 502 Gene3D - 15 484 IPR036188 -
Tpr6g2738 502 SUPERFAMILY FAD/NAD(P)-binding domain 14 491 IPR036188 -
Tpr6g2738 502 SUPERFAMILY FAD-linked reductases, C-terminal domain 329 438 - -
Tpr6g2738 502 TIGRFAM proto_IX_ox: protoporphyrinogen oxidase 14 492 IPR004572 GO:0004729|GO:0006779
Tpr6g2738 502 MobiDBLite consensus disorder prediction 220 239 - -
Tpr6g2738 502 Gene3D protoporphyrinogen ix oxidase, domain 3 109 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2738 Tpr-Chr6 29929736 29939622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2738 K00231 - gmx:547941 851.662