Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2737 ATGTTGAAATCTAAGGAACCTCCTTTATGTTCATGTAAAAATCCTTTGTGGGTTGCAGCTTTTTTCTTCAAACAGCTCAAGAAAGTTCAAATCATGGATGCTGACATTTCTTCCTCTGTAGACAAGATTATGCATTATGAAATGGACGCTGTTTCCTATAGAATACTTGCATATCTTGTTCTTGGTGTTGTTAAAACATACTCAAAGAAGGTTGAGTATCTACTCGATGATTGCAATGACGTGCTCAGTGAAATCAACAAATTTGTGATAAATACAAAGAACAACGCACCTGTCAAAGCCGTGCGTATGGCTTTTATTATGCCTGACACATTTGAGTTGGATGCTATTGATCTTGGTGAACTCGAAGATACTTCTGGGTATCATACTGCTCCCCCAGAACAAATCACTCTTAAAGAAGTTTTGTCTAATACTGGAGGATTTGCGCAGTTTTCTCAAGAGAGGTTTGAGGATTTTGATATGCAGTTTGAGGGTTTTGGTTTCGGAGAAACTAGCTGCTCTCTTGACCAACTTATGGCGGAAAATTTTCTTCAATTTCAACCGATGGACTTCGACTTCGAAGTTTTTCCATCAAATAGTCGAAATAATCTCATTGAAGGGTCTTCTGGAAAACAATTAGAATTTCAAAGAAAGGTGCCGTTTGAAGATGGACAATCTAGCGCTAATCCGTTAGAGTCAACAACCATTAATGAAACTCCTCAATCTAAGTTTCATGATGATTCAACTGCAAGACCAAAACCAAAACCAGGTGCTACGGAATCAAATAGTCGAAATAATCTCATTGAAGGGTCTTCTGAAAAACAATTAGAATTTCAAAAAAAGGTGTCGTTTGAAGATGGACAATCCAGCACTAATCCGTCGGAGGCTACAATCATTAATGAAACTCCTCAATCTAAGTTTCATGGTGCTTTAAGTCAAAAAAGGAAAAAGTTTCATGGTGGTTCAATTGCAAGACCAAAACCAGGTGCTACGAAATCAGATTTTATGCTTATTCCTACACCAGATGCAACGGAAGGTGCTCACTTTTCAAAGAAAAGAAAATTTGTTATTGATGAAACGCAAACCTTGTCTAATGAGATACTCAGAAAGCGCATACATGATGCAAGTGATGTAGTTTCTGTTCGAAAATCATTACGCATCTCTTTGATTGATAAGCTGAGAAAAACTCAGATGTTTAGTCTTCTGAATGGATTCAATGAATCCTTGTTTCCTTATCACTCCCCAAAGCTCCAACGCTTGCTTTCCAACAGCAAATTGGAAATATCAACCTCCCTTAAAATTGGGTCAGATGTGCAAGAATCTGAAGCTGTTGGCATTCCGGAGCATATCGAAATTGCTCCGGAAATCCGTCCAACGCGCTCAGATTCTGTTGCTAATGAAGAAATTCTGGGGGAGGTTGATGCTGCTGAATCTCAAGCAACTGCTCCAGAAACCCCTCCTTTAGGGCCTTCAAGTCCCCGTAGAAGTATAGAGAGGGGGCAACCTTCCGAAAGTAGTGATAATATGGAGGAAGAGGAAATAAATTCTTTGCAGGAAACAAATTCATGTGAAACTGAGAATTCAAATATGTCTGGGTGGTCTGAGCAAACCAGTAAGGTTGCAACCTACTTGAGCAACCAAAAGGAGGCGGGTTCCGTAAACCTTTCAAAAGTTTCAGAAGGGCGAACCAGAAAAGAATCTGCAAGGCTATTTTATGAAATACTGGTCTTGAAAACTACCAATTATGTGGATGTGCAACAAAAGGATGCTTATGGTGATATTGAAGTTAGGAAACTCCCCAAATTTGATCAAACTTTTGGAGTCTGA 1824 0.3909 MLKSKEPPLCSCKNPLWVAAFFFKQLKKVQIMDADISSSVDKIMHYEMDAVSYRILAYLVLGVVKTYSKKVEYLLDDCNDVLSEINKFVINTKNNAPVKAVRMAFIMPDTFELDAIDLGELEDTSGYHTAPPEQITLKEVLSNTGGFAQFSQERFEDFDMQFEGFGFGETSCSLDQLMAENFLQFQPMDFDFEVFPSNSRNNLIEGSSGKQLEFQRKVPFEDGQSSANPLESTTINETPQSKFHDDSTARPKPKPGATESNSRNNLIEGSSEKQLEFQKKVSFEDGQSSTNPSEATIINETPQSKFHGALSQKRKKFHGGSIARPKPGATKSDFMLIPTPDATEGAHFSKKRKFVIDETQTLSNEILRKRIHDASDVVSVRKSLRISLIDKLRKTQMFSLLNGFNESLFPYHSPKLQRLLSNSKLEISTSLKIGSDVQESEAVGIPEHIEIAPEIRPTRSDSVANEEILGEVDAAESQATAPETPPLGPSSPRRSIERGQPSESSDNMEEEEINSLQETNSCETENSNMSGWSEQTSKVATYLSNQKEAGSVNLSKVSEGRTRKESARLFYEILVLKTTNYVDVQQKDAYGDIEVRKLPKFDQTFGV* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2737 607 MobiDBLite consensus disorder prediction 281 308 - -
Tpr6g2737 607 MobiDBLite consensus disorder prediction 254 272 - -
Tpr6g2737 607 MobiDBLite consensus disorder prediction 221 242 - -
Tpr6g2737 607 MobiDBLite consensus disorder prediction 472 532 - -
Tpr6g2737 607 PANTHER SCC1 / RAD21 FAMILY MEMBER 1 606 IPR039781 GO:0007062|GO:0008278
Tpr6g2737 607 Gene3D Structural maintenance of chromosome 1. Chain E 504 605 IPR023093 -
Tpr6g2737 607 MobiDBLite consensus disorder prediction 220 321 - -
Tpr6g2737 607 Pfam Conserved region of Rad21 / Rec8 like protein 549 601 IPR006909 -
Tpr6g2737 607 Pfam N terminus of Rad21 / Rec8 like protein 16 94 IPR006910 GO:0005515
Tpr6g2737 607 SUPERFAMILY "Winged helix" DNA-binding domain 547 601 IPR036390 -
Tpr6g2737 607 MobiDBLite consensus disorder prediction 514 532 - -
Tpr6g2737 607 PANTHER SISTER CHROMATID COHESION 1 PROTEIN 2 1 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2737 Tpr-Chr6 29918772 29924390 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2737 K06670 - gmx:100775734 283.493