Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2700 ATGTCGTCGAGTTCATCGCCGGACATTGTTTCAATTTTGGAGAACTCGAAGGAACTCGATCGGTTAAGGAAAGATCAGGAAGATATTCTATCTGAGATCAACAAGCTTCATAAGAAGCTTCAAACCACTCCTGAAGTGGTTGAGAAGCCTGGAGATAACTCATTAGCAAAGCTGAAAATGTTGTATACTCAAGCAAAAGAACTTTCAGACACTGAAGCAAATCTTTCCACTATGTTGATAAGCCAACTTGATGCCCTGTTTCCTCCTGGACCGCAAGGACAACCACGAAGAAGATTAGGCAATGAGCAGAAAAGGAAACGAGTGAAGACCGAGTCAGACATTTCAAGGTTAACTCCTAGTATGCGAAATCAACTTGAAGCTTGTGCCAGTCTTAAGGGTGAACAGGTAGCAGCTAGGGTCACACCACGTAATGCAGATAAGGACGAATGGTTTGTTGTAAAAGTGATTCATTTTGATAAGGAATTAAAGGAATTTGAAGTACTTGATGAGGAACCTGGTGATGATGAAGATAGCAGTGGTCAAAGACAATACAAGCTTCCCATGGGAAATATCATTCCTTTCCCCAAGAGTAATGATCCTTCAAGTGCCCAAGATTTCCCTCCTGGAAAACATGTTTTGGCAGTTTATCCAGGAACTACTGCACTCTATAAAGCAACAGTTGTTCATGGCCATCGCAGGAGGAAGACAGATGATTATGTGTTGGAGTTTGATGATGACGAAGAAGACGGGTCGCTACCTCAAAGGACTGTGCCCTTCCACAAAGTGGTTCCTCTACCAGAAGGACATCGTCAGTAA 816 0.4277 MSSSSSPDIVSILENSKELDRLRKDQEDILSEINKLHKKLQTTPEVVEKPGDNSLAKLKMLYTQAKELSDTEANLSTMLISQLDALFPPGPQGQPRRRLGNEQKRKRVKTESDISRLTPSMRNQLEACASLKGEQVAARVTPRNADKDEWFVVKVIHFDKELKEFEVLDEEPGDDEDSSGQRQYKLPMGNIIPFPKSNDPSSAQDFPPGKHVLAVYPGTTALYKATVVHGHRRRKTDDYVLEFDDDEEDGSLPQRTVPFHKVVPLPEGHRQ* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2700 271 ProSiteProfiles SGF29 C-terminal domain profile. 126 271 IPR010750 -
Tpr6g2700 271 Coils Coil 19 39 - -
Tpr6g2700 271 PANTHER SAGA-ASSOCIATED FACTOR 29 6 271 - -
Tpr6g2700 271 Gene3D - 134 196 - -
Tpr6g2700 271 MobiDBLite consensus disorder prediction 87 113 - -
Tpr6g2700 271 Gene3D - 197 271 - -
Tpr6g2700 271 PANTHER UNCHARACTERIZED 6 271 IPR037802 GO:0000124
Tpr6g2700 271 Pfam SGF29 tudor-like domain 132 266 IPR010750 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2700 K11364 - gmx:100526864 478.789