Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2354 ATGGCAACATTCTTCACTTCCCACCACTTCACTGCTTTTACTTTCCTCATCTTATTCCTCAAAATCCAATCTTTTGATCCTGTTTCATCCTTTAACTTCACAGATTTTGGTAAAGATCCAAATTTTAAGTCTATTGTAGGACTTTATCACAATGCAAAGGTTGCTAATGGTGGTTCTGAAGCTCTTCTTTATGGGTCTGAGGATTCAGCAAAATGGATAGTCAGGTACAAAAAACCCATCAGGGTTGTTGATGTTGATGGTAAACCAAAGATGTCAGTCTCATTTTCAACTTATTTTGAATTTTCATTGTCTTTGGGTGATGGGAATGGCTTGGCTTTTGTTATGGCTCCAAAGGATGCTGATGAAGATGATGATAGTTCATCTAGGTTACCTTTTGATTTGAAGGTAATAGAAACTAAGGATATTGCTGTTGAGTTTATTGCTTCAAATAAGAGTTCTGCTAGCTTTAGTATCAATATTAAAGTTGGTACTACTCCTGTTAAAAAAATCAATGTCTCTTCTTTTAATATGGTTATAAGAAATGGTGGAAAGTTGTATGCTTGGATTGATTATCAAGCGAGTTCGAGGCATTTGGAAGTTAGGTTGAGTCGATATGGTCATTCAAAGCCGGTTGATCCATTGTTATCGGAATATGTTGATTTGTCGAATAATTGGAAAACTGGAGAGATGTTTGTTGGCTTTGATTCAATGAAAGGGAGACCTTCTTCTCAACCATGTTTTCTCTATTCGTGGAGTTTTAATTTAAGGCATTATCCACGACGGGTGCATTCTGAGCCGCTGGATCCGAAGGCTTTTTCTGCTAAGAACACACATAGTCCATCAGCAGGGAAGCCGAGGAGTGATTGTGTTTTAAAAATTCTTGCTGCAATGATATTTGGTGCTGGATGTGGAGCATTGGCTGCATTCACCGTGCTTTATTTGTGGACAATGTTTGGTAATAGACGTCCTGTGGCTGTGGTTCCAGAGGAGTGTGTTATGCAGCCGGTAGATTTTGAGTACAAGAAAGTGAACATTGTTGTAGATAAACCCCTTAAAGATGCTAAGGAGTAG 1071 0.3838 MATFFTSHHFTAFTFLILFLKIQSFDPVSSFNFTDFGKDPNFKSIVGLYHNAKVANGGSEALLYGSEDSAKWIVRYKKPIRVVDVDGKPKMSVSFSTYFEFSLSLGDGNGLAFVMAPKDADEDDDSSSRLPFDLKVIETKDIAVEFIASNKSSASFSINIKVGTTPVKKINVSSFNMVIRNGGKLYAWIDYQASSRHLEVRLSRYGHSKPVDPLLSEYVDLSNNWKTGEMFVGFDSMKGRPSSQPCFLYSWSFNLRHYPRRVHSEPLDPKAFSAKNTHSPSAGKPRSDCVLKILAAMIFGAGCGALAAFTVLYLWTMFGNRRPVAVVPEECVMQPVDFEYKKVNIVVDKPLKDAKE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2354 356 Pfam Legume lectin domain 29 263 IPR001220 GO:0030246
Tpr6g2354 356 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 355 - -
Tpr6g2354 356 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 355 - -
Tpr6g2354 356 Gene3D - 28 255 - -
Tpr6g2354 356 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 257 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2354 Tpr-Chr6 25819946 25821377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2354 48 345 Receptor kinase-like Gene Family AT4G29050 28.000 2.98e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2354 - - gmx:100815991 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2354 6 25819946 25821377 Tpr6g2354 6 25819946 25821377 ECH
Tpr6g2354 6 25819946 25821377 Tpr4g0794 4 7386971 7388497 PCT