Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2288 ATGGTCGGACCAATTCGGCCACAATTTGTTCTGTTTGGTTCTTCCATTGTTCAGCTCAGTTTTTTGAAAGAAGGTTGGGGTGCTATTCTTTCTCACTTGTATTCTCGCAAGGCTGATATAGTTCTGCGAGGATACTCTGGTTGGAATACAAGGCGCGCTGTGCAGGTTCTAGATACAATTTTTCCCAAGAATGCCACCGAGCAACCTTCGTTGATAATAGTGTACTTCGGTGGTAATGATTCTATTCTTTCACATCCAAGTGGCCTTGGTCAACATGTACCTCTCCAAGAATACATTGAAAATATGAAGAAGATTGCTAACCATCTCAAGAGCCTGTCAAAGAAGACTCGCCTTATATTTCTCAGTGCTCCTCCTGTCAATGAGGCACAAATTTATGGAAACAGTTGTATAAAGAAGCCGCCAAGGAATAATGAATCCTGTCGAATATATTCAGAAGCATGTTTGGAGCTATGTCGCGAGATGAATATCAAGGCCATTGATCTGTGGTCTTTACTCCAGAAAAGGGATGACTGGCGAGATGTTTGCTTCACGGATGGAATTCATCTGACATCCGAGGGTAGCAAGATAGTGGTAAAAGAGATACTTAATGTTCTCAAAGAAGCAGATTGGGAACCTTGCTTGCATTGGAAGTCACTGCCAAATGAATTTGGAGAAGATTCACCCTATGATCCACTTGGCCCAGATGAAAAATCAACTTTGAATGTTTCCAGCTTGACCTTCCTGGAAACTTCAGAATATGATTGA 765 0.4183 MVGPIRPQFVLFGSSIVQLSFLKEGWGAILSHLYSRKADIVLRGYSGWNTRRAVQVLDTIFPKNATEQPSLIIVYFGGNDSILSHPSGLGQHVPLQEYIENMKKIANHLKSLSKKTRLIFLSAPPVNEAQIYGNSCIKKPPRNNESCRIYSEACLELCREMNIKAIDLWSLLQKRDDWRDVCFTDGIHLTSEGSKIVVKEILNVLKEADWEPCLHWKSLPNEFGEDSPYDPLGPDEKSTLNVSSLTFLETSEYD* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2288 254 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 251 IPR045136 -
Tpr6g2288 254 Coils Coil 95 115 - -
Tpr6g2288 254 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 251 - -
Tpr6g2288 254 CDD Isoamyl_acetate_hydrolase_like 8 205 - -
Tpr6g2288 254 Pfam GDSL-like Lipase/Acylhydrolase family 11 195 IPR013830 -
Tpr6g2288 254 SUPERFAMILY SGNH hydrolase 6 206 - -
Tpr6g2288 254 Gene3D SGNH hydrolase 6 229 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2288 Tpr-Chr6 24894757 24898292 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2288 K23978 - gmx:100817293 440.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2288 6 24894757 24898292 Tpr4g0748 4 6988092 6991607 PCT