Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2226 ATGACAATAGCAAAGGCATACCAAATAATAGTGATAGGAAACACTTGGGGAATCAAAAATATCTTTCATTCTCTTGTAGCAATCTTAACCACTCTTTTAGTTATCACAACCATTTATCAAACACAAGATAGATCAGGAGTAAAACTATCTCAAAAAATAAATGTCTCTATTGACTCATTAAATTCATCAAAGTGTGACTTATTTTCTGGTAAGTGGGTTTTTGATAATGTATCTTATCCATTATATAAAGAGAAGGAATGTTCTTTCATGTCAGATCAATTGGCTTGTGAGAAGTTTGGAAGGAAGGACCTAAGTTACCAAAATTGGAGGTGGAAGCCTCACCAATGTGACTTGCCTAGGTTCAATGCCACAAAATTGCTTGAAAGGCTAAGGAACAAGAGGCTTGTATTTGTGGGGGATTCACTCAACAGAGGTCAATGGGTTTCTATGGTTTGTCTTGTTGACTCTATAATACCTTCATCTCTCAAATCCATGCAATCCATTGCCAATGGTTCATTAAACATTTTCAAGATCAAAGAATACAATGCAACCATTGAGAATTATTGGTCACCATTACTAGTAGAATCAAATTCAGATGATCCAGTAAACCATAGGGTACCTGAAAGGACTGTTAGAATCAAGGCCATTGAAAAGCATGCAAAGTATTGGACTGATGCAGACTATATAGTTTTTAACACTTACCTATGGTGGAGAAGGCCTCTTATGAATGCTCTGTGGGGATCATTTGGGGACCCAAATGGGATTTATAAAAGAGTTGAAATGTTGAGAGTGTACGAAATGGCTATGAGGACATGGTCTGATTGGTTGGAAGTTCATGTCAATCGTAACAAGACCCAGTTGTTTTTTGTTAGCATGTCACCTACTCATGAAAGGGCTGAGGAATGGGGAGCTACTAAGGGGGACAATTGTTACAAAGAAACAGATATGATTGCAAAAGAAGGGTATTGGGGGAAAGGATCTGATCCTAAAATGATGCAAGTGGTGGAGAATGTACTTGATGATTTGAAAACAAGAGGTTTGAATGTTCAGATGCTTAACATCACACAGCTTTCAGAATACAGAAAAGAAGGTCACCCATCTATCTATAGGAAACAGTGGGAACCTCTAACTCGAGAACAGATATCAAATCCAAATGGTTATGCAGATTGCATACATTGGTGCCTACCAGGAGTTCCTGATGTATGGAATGAGCTCCTTTATGCCTATATTTTCAATCAATAA 1242 0.3752 MTIAKAYQIIVIGNTWGIKNIFHSLVAILTTLLVITTIYQTQDRSGVKLSQKINVSIDSLNSSKCDLFSGKWVFDNVSYPLYKEKECSFMSDQLACEKFGRKDLSYQNWRWKPHQCDLPRFNATKLLERLRNKRLVFVGDSLNRGQWVSMVCLVDSIIPSSLKSMQSIANGSLNIFKIKEYNATIENYWSPLLVESNSDDPVNHRVPERTVRIKAIEKHAKYWTDADYIVFNTYLWWRRPLMNALWGSFGDPNGIYKRVEMLRVYEMAMRTWSDWLEVHVNRNKTQLFFVSMSPTHERAEEWGATKGDNCYKETDMIAKEGYWGKGSDPKMMQVVENVLDDLKTRGLNVQMLNITQLSEYRKEGHPSIYRKQWEPLTREQISNPNGYADCIHWCLPGVPDVWNELLYAYIFNQ* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2226 413 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 9 412 - -
Tpr6g2226 413 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 9 412 IPR029962 GO:0016413
Tpr6g2226 413 Pfam PMR5 N terminal Domain 64 117 IPR025846 -
Tpr6g2226 413 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 118 408 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2226 Tpr-Chr6 24156457 24161916 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2226 - - gmx:100785941 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2226 6 24156457 24161916 Tpr4g0675 4 6232434 6240704 PCT
Tpr4g0790 4 7364136 7365131 Tpr6g2226 6 24156457 24161916 PCT