Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2215 ATGCCTTGCATTTACATCAGCACAAATCTTAACTTAGATGGAATTGACACTGATCCAATCTTTTCTGAAGTCACCACTGCTATCTCAACAATTATTGGAAGACCTGAAAAGTTTGTGATGGTCCTATTGAAATCATCAGTGCCTATATCGTTTGAAGGAAACAAAGAACCAGCTGCTTATGCTGAGATAATATCAATGGGTGGCATAAATAAAGAAGTCAAGAGGAAACTCATTGCTACCATTGGTACCATATTGCAGTCCAAGCTAGCTATCCCAAGAACACGTTTTTTTGTTAAAGTCTTTGATACTACTGCATTTCCTACTCAATCCAAAATTTAA 339 0.3658 MPCIYISTNLNLDGIDTDPIFSEVTTAISTIIGRPEKFVMVLLKSSVPISFEGNKEPAAYAEIISMGGINKEVKRKLIATIGTILQSKLAIPRTRFFVKVFDTTAFPTQSKI* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2215 112 SUPERFAMILY Tautomerase/MIF 1 104 IPR014347 -
Tpr6g2215 112 PANTHER D-DOPACHROME DECARBOXYLASE 1 112 IPR001398 -
Tpr6g2215 112 Pfam Macrophage migration inhibitory factor (MIF) 2 105 IPR001398 -
Tpr6g2215 112 PANTHER MACROPHAGE MIGRATION INHIBITION FACTOR-LIKE PROTEIN 1 112 - -
Tpr6g2215 112 Gene3D Macrophage Migration Inhibitory Factor 2 107 IPR014347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2215 Tpr-Chr6 24055966 24060032 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2215 K07253 - gmx:100790725 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2215 6 24055966 24060032 Tpr4g0659 4 6088408 6091306 PCT