Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2209 ATGAATAGGAAGAAAACACCAATTTCTTCTCTGACTGGGAATCAGCTTTATTCTCCTAGTCCAAATCTATCCTTTGGAAGGAATTTGACAAAGAATGAACTTGGTGGTGTCGTATTTGGGTGCAAGAATATGACGATTAACGAATGTTTGAACAAACAATTATTTGGCTTACCTGCTGTACACTACTCTTATGTGAAGAACATTCATCCTGGGTTGCCTCTCTTCCTGTTTAACTATAGTGACAGGACGCTTCATGGAATTTTTGAGGCGGCGGGTGATGGAAGAATGTATATTGACCGCTATGCATGGACCAATGACGGTTCAGATGTAACACAATTTCCGGCTCAGGTGCGTGTTCGACTGCAATTACACTGCCGGCCACTAACTGAAGAAAAGTTTAAGCATATAATTGCCGAGAACTACTACATGCATAACCATTTCTGGTTTGAACTCGACCATGGACAAACAAGCCGGCTGATTGCCTTGCTGAAACCCTTGGCAATCGCCCCTGCTAGGTCTGCCAAACCCTTGGCATTCGCCCCTGCTAATTCTGGGCCTGCTAATTTTGTTCCGCAGAATACAAATCAAGCAACTGTATCCCTACCTCTTCCATGGCATGATCCTTCTTGGAAATCTAAAACCTTTAAAATGCCTGAATCAGAGTTAGAGGAGCATCATTCTACCCGCTCAAGTATGATATCAGGTTCCAATGACAGTGATTTATTAGATGAATGCTTTAAGCCATTGGATACCCGTTCGACTGATAAGGAGGAAGCAGCACCAAATGAGAAGGACCTCGTATGGATGAAACTAAAGGAATTGGCTGTTGCTCGTGAAAATCAGAATCTAAGTTGGGATACCAATGTAACTGATACTCCTTATCCGGATGAAAATCAGAATCTAAGTTGGGATAACAATGTAACTGATACTCCTTATGCGGATGAGAATTGGTCTGAAGGAAAGAATTCAGAGGAAAAAGAGGAGAATCCTAGTTCTCCATTACAGAAGGAGAGTTCCAGTTATCCATCTGAGAAGGAGGAGAATTCTAGCTCTCCATTTGAGCATCAATTCGACATAGCTCAGTTGGTGCAAGAGATAAAAGCGCTGACAGATTTCAAAACAACGCAAGCTGAAAAAAATAATTACCTGGAGCAAAAGCTGATAGAAGCAGAATTGCAAATTAAGCTTCTGAAAGACCGATGTGCGCTGTTGGAATCTACACTTGATACTCATCCGACAAATGTTGAGGAGAAAGTAACCAGTCCAACTGCTGAGCTGCATTTAGATGCCAAAGATTCATTTTTTTTAATAGGCGGCTCATATGGAGAATCGTCTATAGCAGACATGGATATGTTTTGTACTTCTCAGAATGTAATCAAATCTCTCAAGCCTATGAACTGTCTCCGATCATATGCTTCAGTTGTAGAGTTCAATGGTCAGATTTATGTTTTTGGTGGTGGAGATGACCGTGTTTGGTTTGACTCAGTTGAATCATACAACCCAATTTCTGATAACTGGACCTTGTGTCCGTCTATGAACCGAAAGAAAGGGAGCTTGTCTGGTGCTGCTTTGAACGATAAAATATTTGCTGTTGGAGGTGGCAATGGTGTTGAGTCCTTCTCAGAAGTCGAGATGCTTGATTTTGACATTGGGCGGTGGATCCCCACACGTTCAATGCTAGACAAGAGATTTGCTCTTGCGGCAGTGGAACTCAATGGTGCAATTTACGCTACCGGTGGATATGATGGAAATTACTATTTAAAGTCTGCGGAAAGATTTGATCCTAGGGAACATGCTTGGTCCAAAATAGCAAACATGAATACAAACCGGGGCTGTCATGCAATGGTTGTTCTAAATGAAAAATTGTATACATTAGGCGGATTTGATGGAGAAACAATGGTTTCAAGTGTTGAAGTCTTTGATCCTCGTCTCGAGAAATGGATGGTGGAGAAAACAACAATGAATCATGCTAGGGGGTATTTTGCTGCTGCAGTTGTGAAAGATTCCATCTATGTGATTGGAGGTGTTAATGGTTGTCAGACTATGGTTGATACTGTCGAGAATTACGAGGAAGGTAAAGGATGGAAGGAAGTTTATACATCGCCAAACACGAAGAGGTGTTTCATGTCAGCTATTCCATGCAGTCATTAA 2151 0.4166 MNRKKTPISSLTGNQLYSPSPNLSFGRNLTKNELGGVVFGCKNMTINECLNKQLFGLPAVHYSYVKNIHPGLPLFLFNYSDRTLHGIFEAAGDGRMYIDRYAWTNDGSDVTQFPAQVRVRLQLHCRPLTEEKFKHIIAENYYMHNHFWFELDHGQTSRLIALLKPLAIAPARSAKPLAFAPANSGPANFVPQNTNQATVSLPLPWHDPSWKSKTFKMPESELEEHHSTRSSMISGSNDSDLLDECFKPLDTRSTDKEEAAPNEKDLVWMKLKELAVARENQNLSWDTNVTDTPYPDENQNLSWDNNVTDTPYADENWSEGKNSEEKEENPSSPLQKESSSYPSEKEENSSSPFEHQFDIAQLVQEIKALTDFKTTQAEKNNYLEQKLIEAELQIKLLKDRCALLESTLDTHPTNVEEKVTSPTAELHLDAKDSFFLIGGSYGESSIADMDMFCTSQNVIKSLKPMNCLRSYASVVEFNGQIYVFGGGDDRVWFDSVESYNPISDNWTLCPSMNRKKGSLSGAALNDKIFAVGGGNGVESFSEVEMLDFDIGRWIPTRSMLDKRFALAAVELNGAIYATGGYDGNYYLKSAERFDPREHAWSKIANMNTNRGCHAMVVLNEKLYTLGGFDGETMVSSVEVFDPRLEKWMVEKTTMNHARGYFAAAVVKDSIYVIGGVNGCQTMVDTVENYEEGKGWKEVYTSPNTKRCFMSAIPCSH* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2209 716 MobiDBLite consensus disorder prediction 318 332 - -
Tpr6g2209 716 ProSiteProfiles DCD domain profile. 32 165 IPR013989 -
Tpr6g2209 716 PANTHER - 16 712 IPR044832 GO:0034976
Tpr6g2209 716 MobiDBLite consensus disorder prediction 286 317 - -
Tpr6g2209 716 MobiDBLite consensus disorder prediction 217 237 - -
Tpr6g2209 716 Pfam Development and cell death domain 35 162 IPR013989 -
Tpr6g2209 716 Pfam Kelch motif 469 513 IPR006652 GO:0005515
Tpr6g2209 716 Pfam Kelch motif 521 559 IPR006652 GO:0005515
Tpr6g2209 716 Pfam Kelch motif 610 648 IPR006652 GO:0005515
Tpr6g2209 716 Pfam Kelch motif 657 689 IPR006652 GO:0005515
Tpr6g2209 716 Pfam Kelch motif 566 607 IPR006652 GO:0005515
Tpr6g2209 716 MobiDBLite consensus disorder prediction 286 353 - -
Tpr6g2209 716 Gene3D - 592 715 IPR015915 GO:0005515
Tpr6g2209 716 SUPERFAMILY Kelch motif 432 711 IPR015915 GO:0005515
Tpr6g2209 716 Coils Coil 380 407 - -
Tpr6g2209 716 PANTHER INFLUENZA VIRUS NS1A-BINDING PROTEIN 16 712 - -
Tpr6g2209 716 SMART kelc_smart 527 573 IPR006652 GO:0005515
Tpr6g2209 716 SMART kelc_smart 574 620 IPR006652 GO:0005515
Tpr6g2209 716 SMART kelc_smart 669 716 IPR006652 GO:0005515
Tpr6g2209 716 SMART kelc_smart 480 526 IPR006652 GO:0005515
Tpr6g2209 716 SMART kelc_smart 433 479 IPR006652 GO:0005515
Tpr6g2209 716 SMART kelc_smart 621 668 IPR006652 GO:0005515
Tpr6g2209 716 SMART dcd 32 165 IPR013989 -
Tpr6g2209 716 Gene3D - 407 591 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2209 Tpr-Chr6 23967751 23973199 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2209 569 674 EF-hand Containing Proteins AT4G39560 28.704 2.04e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2209 - - cam:101507160 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2209 6 23967751 23973199 Tpr6g2209 6 23967751 23973199 ECH
Tpr6g2209 6 23967751 23973199 Tpr4g0658 4 6084722 6085828 PCT