Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2208 ATGTTAAAATACATCACAAAAGAATCACATTCCTCCACAACCAACATGTTCATCCAATTCTCCATCCTCTTTCTCCTCTTCACTACTCCCTTTACATCTTTAATCAAAGCAAAACAAGACAACAACAATTTCGTGCATTCATTAGACCTCAAAGAATTAAATTTAGAAAATAAACAAGAGAAGCTAAGCCATTTAAAGTTCTATTGGCATGACATAGTTAGTGGAAACAACCCTTCTTCAATGGTAATTGTTCCACCACCTTTGAAAAACTCAACCACTGCCTTTGGTTTAGTTAACATGATTGAGAACCCTTTAACCTTAGGACCTCAATTAAGCTCTAAGTTGGTTGGAAAAGCACAAGGATTCTATGCATCAACATCACAAAGTGAGGTAGACCTTATCATGGCCATGAATTTTGCTATCATTGAAGGGAAGTACAATGGTAGCACCATCACTATTTTGGGGAGGAACCCTGTTTATGACAAGGTTAGGGAAATGCCTATAATTGGTGGAAGTGGTCTTTTCAGATTTGCTAGAGGATATGCTCAGCTTAGAACTCATTGGTTTTCATCCAAGACAAATGATGCTATAGTTGAGTACAATATTTATGTGTTACATTATTAA 624 0.3622 MLKYITKESHSSTTNMFIQFSILFLLFTTPFTSLIKAKQDNNNFVHSLDLKELNLENKQEKLSHLKFYWHDIVSGNNPSSMVIVPPPLKNSTTAFGLVNMIENPLTLGPQLSSKLVGKAQGFYASTSQSEVDLIMAMNFAIIEGKYNGSTITILGRNPVYDKVREMPIIGGSGLFRFARGYAQLRTHWFSSKTNDAIVEYNIYVLHY* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2208 207 PANTHER DIRIGENT PROTEIN 16 206 - -
Tpr6g2208 207 Pfam Dirigent-like protein 63 204 IPR004265 -
Tpr6g2208 207 PANTHER NUCLEOPORIN-RELATED 16 206 IPR004265 -
Tpr6g2208 207 Gene3D - 50 204 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2208 Tpr-Chr6 23957427 23958162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2208 - - gmx:100796078 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2208 6 23957427 23958162 Tpr4g0654 4 6060589 6061491 PCT
Tpr4g0656 4 6068935 6069818 Tpr6g2208 6 23957427 23958162 PCT