Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1960 ATGAAGAAATTTGTACTGAAATTAGATTTAGAAGATGATAAGGCAAAGCAGAAGGCCTTGAAGACAGTTTCAACACTTTCAGGAATTGATGCAATCACCATGGACATGAAGGAGAAGAAATTAACCGTGGTAGGAACGGTAGATCCAGTAAAAATCGTGAGCAAACTTCGAAAATATTGGCAAGCCGATTTAATCTCAGTAGGACCAGCAAAGGAGCCAGAGAAGAAAGAAGAGGCAAAGAAAGAAGAACCAAAGAAGGAAGAAGAGAAGAAAGAAGGGGAAAAGAAAGAAGAAGCAAAGAAAGAAGAAGAGAAGAAGGAAGAACCAAAGAAAGAAGAAGAGAAAAAGGAAGAGAAGAAAGAAGAAGAGAAAAAAGAAGAAGAGAAAAAGAAAGAGCCAACACCTGACCCTGTTTTAGAAATGGTTAAAGCTTATAGGGCATATAATCCTCACATGACTACATATTATTATGTTCAAAGTATGGAAGAAAATCCAAATGCTTGTGTGATTTGTTAA 516 0.3643 MKKFVLKLDLEDDKAKQKALKTVSTLSGIDAITMDMKEKKLTVVGTVDPVKIVSKLRKYWQADLISVGPAKEPEKKEEAKKEEPKKEEEKKEGEKKEEAKKEEEKKEEPKKEEEKKEEKKEEEKKEEEKKKEPTPDPVLEMVKAYRAYNPHMTTYYYVQSMEENPNACVIC* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1960 171 MobiDBLite consensus disorder prediction 69 137 - -
Tpr6g1960 171 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 114 - -
Tpr6g1960 171 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 91 171 - -
Tpr6g1960 171 MobiDBLite consensus disorder prediction 64 139 - -
Tpr6g1960 171 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Tpr6g1960 171 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 91 171 - -
Tpr6g1960 171 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 114 - -
Tpr6g1960 171 Coils Coil 76 132 - -
Tpr6g1960 171 Gene3D - 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1960 Tpr-Chr6 21217148 21220523 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1960 - - gmx:100305540 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1960 6 21217148 21220523 Tpr5g1344 5 26267056 26269495 PCT