Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1617 ATGGAATCTGCACAAAAAGACTCACTAGTTTCTCACTTTAGCCATCCACATCTTTTGGAACACACTAACAGTAACACACCCTCCAAAACAAACATAAAGTGCTTTGCATGCAACCTAAGAATCACACATGAAGAAGATTACTACATGTGTAAAACTTGTCCTTTTTTTCTTCACAATGTTTGTTACAAGACACCTTTAATAACAAACCACCCTTCACATCCAAAACATGATCTATTCCTCTTTGTTATACCTTCATCACCTGTTACAAAAACCACCTTCAATTGCTTGGCTTGTAAGCAACATGTCATTGGTTTTTGTTATCATTGTTCTGAATGTAACATCTTCTTTCATTCTCTATGTATCACACTTCCTCTCTCACTTTCAATCACACAACATCCGCATAAAATAAAGCTCGAATTTTCGCCACCCTATGATTTCTTTTGTGACTTGTGTAACAATAATAAACCTAGTTATAAAGGGTGGCTCTATAGGTGTAGTATGTGTGAATTTGATATACATATAGCTTGTGCAGTTAAGAACATTGAACCTCATTTGTTAAGGCAAAAAGGGAGTGATTATAACTATAAGATCATGAATTTGGTGTCACAAGGAATTAGAAATGAGAGTGCAGTTTCTGGATGGAATAAGAAATTGTTTAGTCCATTGAAAAAACATAGCACAAGCAATGGAAAAAGCATTGAATTGCAAGAAACAGAAAAAATCACAAGTACTAATTCTGTTTCTTTAGAAATTTTGGAAGATATTACTCCGCTTCGCGATAAAATGACTCCTCTTTCTGATGATAGAAGTCCACTATCATCAAGTCAACAATTTAGTGACTCATATTTTTCAATAGATTTGAACAAGTCTTATTCAACAAATCATCATGATCATAGAAGTCAGGTACGAAAAGAAGTTAATAGCGATTATATTAGCCGAAATGTTGTGTCAAGTAATTCAAGGCAAGGTGAAGAAGAATCAATTGGTGTAGTTGATTATTGGCTAAAAAATCATTCACACAAGGATAAGATGAATGCAGCATTTTCCAAAGGAGGTAGTGATTTTGAAGAATCAAGTCAGAAAGTTGTAGTGAAAAATCCTAAAGAAAGATTGGCCAAGTGGCCTGTTAAAGATCAAACAGCCATAAGAGTAGAATCAGAAAGAAGCAACCATTCAGGTTGGAGGAAGTTGCTAAATTGTTGCCTTTAG 1209 0.3449 MESAQKDSLVSHFSHPHLLEHTNSNTPSKTNIKCFACNLRITHEEDYYMCKTCPFFLHNVCYKTPLITNHPSHPKHDLFLFVIPSSPVTKTTFNCLACKQHVIGFCYHCSECNIFFHSLCITLPLSLSITQHPHKIKLEFSPPYDFFCDLCNNNKPSYKGWLYRCSMCEFDIHIACAVKNIEPHLLRQKGSDYNYKIMNLVSQGIRNESAVSGWNKKLFSPLKKHSTSNGKSIELQETEKITSTNSVSLEILEDITPLRDKMTPLSDDRSPLSSSQQFSDSYFSIDLNKSYSTNHHDHRSQVRKEVNSDYISRNVVSSNSRQGEEESIGVVDYWLKNHSHKDKMNAAFSKGGSDFEESSQKVVVKNPKERLAKWPVKDQTAIRVESERSNHSGWRKLLNCCL* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1617 402 PANTHER - 10 319 - -
Tpr6g1617 402 Pfam C1 domain 132 177 IPR004146 -
Tpr6g1617 402 Pfam C1 domain 71 121 IPR004146 -
Tpr6g1617 402 Pfam C1 domain 13 61 IPR004146 -
Tpr6g1617 402 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 10 319 - -
Tpr6g1617 402 SUPERFAMILY Cysteine-rich domain 140 179 IPR046349 -
Tpr6g1617 402 SUPERFAMILY Cysteine-rich domain 44 134 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1617 Tpr-Chr6 17332072 17333686 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1617 - - gmx:102661734 404.445
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1617 6 17332072 17333686 Tpr6g1617 6 17332072 17333686 ECH