Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1615 ATGATGGTCAAAGGTATCCAACTTCAGCTATGCGGATTTGTTAGCAGCCAACGTTGGAATCTAAAACCAATAGCAACTTCTCTTTCATTCTCATCACTTTCCCCAATCTCATACCCTAACCCTAACCCTAATCCTAACCCTTCTCTCAAACTCCTTCCCACTCTTCGCACCACTCGATTCGCACCGTTTCGTGCTTCCTCATCGCTTCAATCTTCTGGGAATGTTCGAAGTATCAAATTCTGTCAATGGTGTGGTGGTTCGACTAAACATGATATACCTGATGGAGAAGAAAAGTTGAGAGCTATATGTACACTTTGTGGGAGAATTGCTTATCAGAATCCCAAAATGGTAGTTGGTTGCCTCATTGAACATGATAATAAGGTCCTCCTTTGCAAGAGGAATATTCAACCATCTCATGGTCTTTGGACGCTTCCCGCTGGTTATTTGGAAATTGGAGAGTCAGCTCTGGAAGGTGCCGTAAGGGAAACAAGGGAGGAAGCAAATGCAGATGTAGAAGTAATTTCTCCCTTTGCTCAATTGGACATTCCTTTAATTGGACAAACTTACATGATATTCTTAGCAAAGCTGAAGAAGCCCCATTTTTCACCCGGTCCAGAATCATCAGAATGCCAACTTTTTTCACTTGATGATATACCTTTTAATTCTCTATCCTTTTCATCAATGGTGGTTACCTTGAGTTTGTATGTTGAGGATATCAAGGCCGGCAAGCCCAAATTTCATTATGGAACCATTAAGAAAAGGCCTGGTACAAGTCCTTCTGATATTCGTGCTTACACACTAGATCATCACATGCACACATGA 822 0.4161 MMVKGIQLQLCGFVSSQRWNLKPIATSLSFSSLSPISYPNPNPNPNPSLKLLPTLRTTRFAPFRASSSLQSSGNVRSIKFCQWCGGSTKHDIPDGEEKLRAICTLCGRIAYQNPKMVVGCLIEHDNKVLLCKRNIQPSHGLWTLPAGYLEIGESALEGAVRETREEANADVEVISPFAQLDIPLIGQTYMIFLAKLKKPHFSPGPESSECQLFSLDDIPFNSLSFSSMVVTLSLYVEDIKAGKPKFHYGTIKKRPGTSPSDIRAYTLDHHMHT* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1615 273 Gene3D - 77 112 - -
Tpr6g1615 273 PANTHER BNAA03G19740D PROTEIN 66 272 - -
Tpr6g1615 273 Pfam NUDIX domain 117 218 IPR000086 -
Tpr6g1615 273 SUPERFAMILY Nudix 79 237 IPR015797 -
Tpr6g1615 273 ProSitePatterns Nudix box signature. 147 168 IPR020084 GO:0016787
Tpr6g1615 273 ProSiteProfiles Nudix hydrolase domain profile. 113 236 IPR000086 -
Tpr6g1615 273 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 113 264 - -
Tpr6g1615 273 PANTHER NUDIX HYDROLASE 23 66 272 - -
Tpr6g1615 273 Pfam Nudix N-terminal 79 112 IPR029401 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1615 K18453 - gmx:100808417 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1615 6 17316730 17320821 Tpr6g1615 6 17316730 17320821 ECH