Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1578 ATGAAAGTACGTACAACTTCATTAGATCCAAGTACCACCAATAACTATTCAAAACCAACGAATAAAAACTCGCCACGTAACCATACTCCCCATGCAGTTCACCCCACCAGAACACTCTCTCTCTTTCCTTTCTCTCCCACCAATACTAGTTTTCGTTCGATTCCAAAGATCTGCAACACTCTCTTCTCCATTCATTTCTCACATGTTGTTTTCTTCTCTTTTCTCACCATGACAGAACCACCATCACCACAATCAACCGAACCACCATTACCACCACCACCATCACCACCATCAACCACCGTTATTCATCCACGTCGTGAACCATTTGAACACGGTTTATTACCAATTCCAAAACTCATCTTCTCCGACCCCACACAAACCCTAATTTCATTCAAACATAAGCTTATTGAATTATCTTCTAATAATCGAGTTGACTCGGTTGCGGTTTCTGAGTCTCTTCAGATCTCGGTTGAACAAGCGAAGCTTGTTCTTGATACTATCGCTTCGATTTTACCTTATGAGTCTGAATCTGATGATACCGTTGATGTTCATGATCTCGTTTTGTTTTTATATATTCAATCTTATAAGAGGCTTCTTCCCAGAACGCATAAGGATTCCGCCGCTGTTGCTGATGTTTGGCCTTCTACTTCCGCCTTTGATGGTTACTTGTCCGCTCTCTCACCGCTTCAGCTAGTGAGGAGCAACAGTAAGCGGTTTACGCCATCACAGGCTGATGAAGAATCACATCAGTTGTCTTATCTGCAAAAGCATATGGCTAACATTGTGTCTCTTCTAGCAGAGCCTGTGGAAGGGGAAAGTGAAGAATCTCTGGTTTTAACTATGGATAGATTCGAGCACCTTGGTCTTCTTATTCAATATGGTGATAAAGGCTCTGAAGGAAATTCTTTGAGTCAATCTTCTCCATTTTTTGCAAACTCGGATCCTGACATGCCTGCCGTTCCCGTACCCGCTTCTCAAGTTCATGATTGGCTTCTGGAGAACATAGCTTCTGCTTTGGAGTATATTGCTGAACGGACATCTTCCAAAGAAAATGGCCCAGTTAGCGCCTCTGATCAGGATGTTGCTATGACTGATGCATCCACTGTCTCAGTTAAGGTCTCAACAAGTGCTAGGGGTGCAAGTTTCATTGAAGGGATTTCTAAATCATCATATGCGAAGCATGCATCTGACATTAAAGGTTCCTCCGTTAAGGTTCTAAATTGCCACGAGTCTGCCATTTACATCCTAGCACCTTTGAGATACGCCACCATCTACGGATGTTCAGATGCGACAATATTTATTGGAGCAGTTGGAAAGGCTGTGAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTAGCAGCAAAACGAATTTGTATTGCTAACTGCCGTGAATGTGTATTCTTTTTGGGAGTGAACCAGCAACCCCTTATTGTCGGTGATAACCATAAGTTGCAGGTGGCTCCCTTTAATACCTTTTACTCCCAGTTGGAGGAACATATGAATGAAGTTGGAGTTCTGCCCACAGTGAATCGTTGGGATGAACCTATAGCATTGGGAATAGTTGATCCCCATGATTCACTATCTCATCCAGCAGGTGTCTCCGATGTTCAAACTGAGTCTGCTACTAGGGTGGACCCTGATCAGTTCACTAATTTTGTGATTCCAAACTGGCTTGGAGGAGAGTCCACCGGTTCTACAAAAGACAACCCATTCACATTACCAGAGGCTTATATGGCATCTCAGCAAAGAAATGAAAAGAATCTAGGGGAGATAAGGCAACTGTTACGAGAAGCACCTTTAGAAGAAAGTCGTAAACGAGAATTGTCGTCTGCACTTCATGTGTATTTTAAGGACTGGTTATATGCTTCTGGTAACATTCGTCAGCTTTACTATCTACAAGGAGATTGA 1911 0.428 MKVRTTSLDPSTTNNYSKPTNKNSPRNHTPHAVHPTRTLSLFPFSPTNTSFRSIPKICNTLFSIHFSHVVFFSFLTMTEPPSPQSTEPPLPPPPSPPSTTVIHPRREPFEHGLLPIPKLIFSDPTQTLISFKHKLIELSSNNRVDSVAVSESLQISVEQAKLVLDTIASILPYESESDDTVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALSPLQLVRSNSKRFTPSQADEESHQLSYLQKHMANIVSLLAEPVEGESEESLVLTMDRFEHLGLLIQYGDKGSEGNSLSQSSPFFANSDPDMPAVPVPASQVHDWLLENIASALEYIAERTSSKENGPVSASDQDVAMTDASTVSVKVSTSARGASFIEGISKSSYAKHASDIKGSSVKVLNCHESAIYILAPLRYATIYGCSDATIFIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPFNTFYSQLEEHMNEVGVLPTVNRWDEPIALGIVDPHDSLSHPAGVSDVQTESATRVDPDQFTNFVIPNWLGGESTGSTKDNPFTLPEAYMASQQRNEKNLGEIRQLLREAPLEESRKRELSSALHVYFKDWLYASGNIRQLYYLQGD* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1578 636 PANTHER CYCLASE-ASSOCIATED PROTEIN CAP/SEPTUM FORMATION INHIBITOR MINC-RELATED 87 636 - -
Tpr6g1578 636 Pfam Tubulin binding cofactor C 400 515 IPR012945 -
Tpr6g1578 636 Gene3D - 380 542 IPR016098 -
Tpr6g1578 636 PANTHER UNCHARACTERIZED 87 636 IPR039589 -
Tpr6g1578 636 MobiDBLite consensus disorder prediction 1 32 - -
Tpr6g1578 636 SMART carp 446 480 IPR006599 -
Tpr6g1578 636 SMART carp 408 445 IPR006599 -
Tpr6g1578 636 ProSiteProfiles C-CAP/cofactor C-like domain profile. 353 506 IPR017901 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1578 Tpr-Chr6 17044757 17052242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1578 K16810 - gmx:100780410 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1578 6 17044757 17052242 Tpr6g1578 6 17044757 17052242 ECH