Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1576 ATGCAGAGGCCTCCACCAGAAGATTTTCTGTTGAAAGAAACCAAACCCCACCTTGGTGGTGGTAAGATTTCTGGAGACAAGCTTACTAGTACCTATGACCTCGTTGAGCAAATGCAGTATCTTTATGTGAGGGTTGTGAAGGCTAAGGAATTGCCTTCTAAAGATGTTACTGGAAGTTGTGACCCTTATGTTGAAGTCAAGCTTGGTAACTACAAAGGTACTACTAGGCATTTTGAGAAGAAGACTAATCCGGAGTGGAGTCAGGTTTTCGCTTTCTCGAAAGACCGGATTCAGGCTTCGATCCTTGAGGTTACTGTGAAAGATAAGGATGTTGTGAAGGATGATTTTATTGGGCGTGTTTGGTTTGATCTCAATGAGATCCCGAAGAGGGTTCCTCCGGATAGTCCTTTGGCGCCTCAGTGGTATAGGTTGGAGGACAGAAAGGGTGATAAGGCTAAGGGGGAGCTGATGCTTGCTGTTTGGATGGGTACGCAGGCTGATGAAGCGTTTCCTGAGGCATGGCACTCGGATGCGGCGACTGTTAGTGGGACTGATGCTCTTGCAAACATTAGGTCTAAGGTGTATTTATCTCCTAAGCTTTGGTATTTGAGGGTTAATGTGATAGAGGCACAAGACTTGCAGCCGTCTGACAAGGGAAGATTTCCGGAGGTTTACGTCAAGGCTATTCTTGGAAATCAGACATTGAGGACGAGAATCTCTCAGAGCAGGAGTATCAATCCGATGTGGAACGAGGATTTGATGTTTGTGGCTGCAGAACCGTTTGAGGAGCCGCTGATTTTGAGTGTGGAAGACAGGGTTGCGCCTAACAAAGAGGAACTGCTAGGGAAGTGTGTTATTCCTTTACATCTTATGGACAGAAGACTCGATCACAAACCTGTGAATACTAGGTGGTTCAATATTGAAAAGCATGTTGTTATAATGGAAGGGGACAAGAAGAAGGAAATCAAGTTTGCAAGCAGGATTCATATGAGGGTCTGTCTAGAAGGCGGTTATCATGTTTTGGATGAATCAACTCACTACAGTAGTGATCTTCGCCCAACGGCAAAACAACTTTGGAAGTCAAGTATTGGAGTTCTTGAAGTAGGTATATTGAATGCTTCAGGTTTGATGCCGATGAAAACAAGTAACGGGAGGGGGACAACAGATGCTTATTGTGTAGCTAAGTATGGTCAGAAGTGGGTGCGGACAAGAACCATCATCGATAGCTTTGCACCCCGGTGGAATGAGCAGTATACTTGGGAGGTGTTTGATCCATGCACTGTCATTACAATTGGTGTATTCGATAACTGTCATTTGCATGGTGGTGGTGATAAGCCTGGAGGACAAAGAGATTCGAAAATCGGCAAGGTACGAATCCGTCTTTCCACACTTGAGACTGATCGAGTCTATACTCATTCCTATCCACTTCTAGTTCTTCATCCAACCGGGGTGAAGAAAATGGGAGAAATTCAACTTGCCGTAAGGTTTACTTGCTCTTCTTTGCTTAACATGATGCACATGTATTCAAATCCATTGTTACCTAAGATGCATTACATTCATCCATTAACTGTAAGCCAGCTAGACAGTCTGAGGCATCAAGCCACTCAGATTGTCTCGATGAGACTGAGCCGTGCTGAGCCGCCGTTGAGAAAGGAGGTAGTGGAATATATGCTGGATGTTGGTTCCCACATGTGGAGCATGAGAAGAAGCAAAGCCAACTTTTTCAGAATCATGGGAGTTTTGAGTGGATTAATAGCTGTTGGAAAATGGTTTGACCAAATCTGCAATTGGAAAAACCCTATCACAACAGTTCTGATTCATATCTTATTTATAATACTTGTCATGTACCCTGAACTTATCTTACCAACAATTTTCCTTTACCTCTTTTTGATTGGAATTTGGTACTATAGATGGAGGCCGAGACACCCTCCTCACATGGACACACGTCTCTCACATGCAGATTCCGCACACCCTGACGAACTTGATGAAGAGTTCGACACATTTCCAACCACAAGACCTTCTGACATTGTGAGGATGCGATACGATCGTCTTAGAAGTATCGCCGGGAGAATACAAACTGTTGTCGGCGATTTGGCTACTCAAGGTGAGAGACTGCAGTCTTTACTGAGCTGGAGAGATCCAAGAGCTACTGCACTTTTCGTCATTTTCTGTTTGATTGCTGCTATTGTTCTTTATGTGACTCCATTTCAAGTTGTGGCTCTTCTCAGTGGAATTTACGTGTTGAGACATCCGAGGTTTCGTCACAAGCTTCCTTCGGTGCCGCTCAATTTCTTCAGGAGGTTGCCCGCAAGAACTGATTGTATGCTTTGA 2331 0.4432 MQRPPPEDFLLKETKPHLGGGKISGDKLTSTYDLVEQMQYLYVRVVKAKELPSKDVTGSCDPYVEVKLGNYKGTTRHFEKKTNPEWSQVFAFSKDRIQASILEVTVKDKDVVKDDFIGRVWFDLNEIPKRVPPDSPLAPQWYRLEDRKGDKAKGELMLAVWMGTQADEAFPEAWHSDAATVSGTDALANIRSKVYLSPKLWYLRVNVIEAQDLQPSDKGRFPEVYVKAILGNQTLRTRISQSRSINPMWNEDLMFVAAEPFEEPLILSVEDRVAPNKEELLGKCVIPLHLMDRRLDHKPVNTRWFNIEKHVVIMEGDKKKEIKFASRIHMRVCLEGGYHVLDESTHYSSDLRPTAKQLWKSSIGVLEVGILNASGLMPMKTSNGRGTTDAYCVAKYGQKWVRTRTIIDSFAPRWNEQYTWEVFDPCTVITIGVFDNCHLHGGGDKPGGQRDSKIGKVRIRLSTLETDRVYTHSYPLLVLHPTGVKKMGEIQLAVRFTCSSLLNMMHMYSNPLLPKMHYIHPLTVSQLDSLRHQATQIVSMRLSRAEPPLRKEVVEYMLDVGSHMWSMRRSKANFFRIMGVLSGLIAVGKWFDQICNWKNPITTVLIHILFIILVMYPELILPTIFLYLFLIGIWYYRWRPRHPPHMDTRLSHADSAHPDELDEEFDTFPTTRPSDIVRMRYDRLRSIAGRIQTVVGDLATQGERLQSLLSWRDPRATALFVIFCLIAAIVLYVTPFQVVALLSGIYVLRHPRFRHKLPSVPLNFFRRLPARTDCML* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1576 776 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
Tpr6g1576 776 CDD C2D_MCTP_PRT_plant 365 493 - -
Tpr6g1576 776 PANTHER PROTEIN QUIRKY-LIKE 1 776 - -
Tpr6g1576 776 Gene3D C2 domain 39 161 IPR035892 -
Tpr6g1576 776 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 1 776 - -
Tpr6g1576 776 Gene3D C2 domain 362 500 IPR035892 -
Tpr6g1576 776 Pfam C2 domain 364 476 IPR000008 -
Tpr6g1576 776 Pfam C2 domain 40 133 IPR000008 -
Tpr6g1576 776 Pfam C2 domain 201 307 IPR000008 -
Tpr6g1576 776 Gene3D C2 domain 188 333 IPR035892 -
Tpr6g1576 776 ProSiteProfiles C2 domain profile. 22 142 IPR000008 -
Tpr6g1576 776 Pfam Plant phosphoribosyltransferase C-terminal 621 776 IPR013583 -
Tpr6g1576 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 40 177 IPR035892 -
Tpr6g1576 776 ProSiteProfiles C2 domain profile. 347 474 IPR000008 -
Tpr6g1576 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 355 IPR035892 -
Tpr6g1576 776 CDD C2C_MCTP_PRT_plant 202 353 - -
Tpr6g1576 776 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 364 505 IPR035892 -
Tpr6g1576 776 SMART C2_3c 365 473 IPR000008 -
Tpr6g1576 776 SMART C2_3c 40 136 IPR000008 -
Tpr6g1576 776 SMART C2_3c 202 300 IPR000008 -
Tpr6g1576 776 CDD C2B_MCTP_PRT_plant 40 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1576 Tpr-Chr6 17028255 17031968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1576 1 776 Lipid Metabolism Gene Families AT3G57880 90.335 0.0 1479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1576 - - gmx:100818371 1510.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1576 6 17028255 17031968 Tpr6g1576 6 17028255 17031968 ECH