Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1569 ATGAGAACCAAGTTTGGTGGAACTGCAATGATTCTAGCATTATGTCTCCTCTCACTACTACTACTGTCCCCAGTTGCATTATCTGAGAAATGTAACCCTCAAGACAAGAAGGTACTCCTCAGATTCAAGAAGGAACTCAACAACCCTTACTTTCTAGCCTCATGGAATCCACAAACGGACTGTTGTGATTGGTATTGCGTCAAGTGCGACATCAAAACGCATCGTATCACGGCCTTAATTATGAAATCTTCTGTGCCAGACACAAATCTCTCGGGCCACATACCCCCGTCCGTCGGTGACCTCCCAAATCTCGAAAACCTCGAATTCCATAAACTTTCCAGGCTCACAGGCCCAATTCAACCCACTATCGCCAAGCTCACAAAACTCAAGTACCTTTTTATCGAATATACCGGTGTCTCAGGCCCGATACCATCTTTCTTGGGCCAACTTAAAAATCTCCAGCTACTTTACCTTTCCGCCAACAACCTCTCAGGCCCAATACCAAGCTCACTTTCCCAGTTGCCTAACCTCGAGTCCTTACATTTGGACCGAAACAAGCTCACTGGCCCAATACCTAAATCATTTGGTTCATTCAAAAAGCCCGGCCCAAATATCGACTTGTCTCACAACCAACTTTCTGGGCCCATTCCAACTTCATTGGGCCAAATAGACCCAGAGAGCATAGACTTTTCGAGGAACAAACTCGAAGGTGATGCTTCCGTGCTTTTCGGGAGCAAGAAAAGGACACGGACACTTGACCTTTCAAGAAACTTATTGTCGTTTGATTTTTCGAAAGTTGATTTTCCAAAACAAAGTTTGATATGGTTGGATGTGAATCATAATAAGATTTATGGGAAGATTCCAGCTGCATTGACAAAAGTGGAAAATTTGCAACTATTTAATGTGAGTTATAATCAATTGTGTGGTGAGATTCCAAGAGGTGGGACTGGAATATTGCAGGACAAGTTTGATGAGTATGCTTACTTGCATAACAAGTGTTTGTGTGGCAAACCACTTTCAAAATGCAAGTGA 1032 0.4312 MRTKFGGTAMILALCLLSLLLLSPVALSEKCNPQDKKVLLRFKKELNNPYFLASWNPQTDCCDWYCVKCDIKTHRITALIMKSSVPDTNLSGHIPPSVGDLPNLENLEFHKLSRLTGPIQPTIAKLTKLKYLFIEYTGVSGPIPSFLGQLKNLQLLYLSANNLSGPIPSSLSQLPNLESLHLDRNKLTGPIPKSFGSFKKPGPNIDLSHNQLSGPIPTSLGQIDPESIDFSRNKLEGDASVLFGSKKRTRTLDLSRNLLSFDFSKVDFPKQSLIWLDVNHNKIYGKIPAALTKVENLQLFNVSYNQLCGEIPRGGTGILQDKFDEYAYLHNKCLCGKPLSKCK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1569 343 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Tpr6g1569 343 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Tpr6g1569 343 Gene3D Ribonuclease Inhibitor 30 343 IPR032675 -
Tpr6g1569 343 SUPERFAMILY L domain-like 30 342 - -
Tpr6g1569 343 PANTHER POLYGALACTURONASE INHIBITOR 1 10 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1569 Tpr-Chr6 16967044 16968286 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1569 72 336 Receptor kinase-like Gene Family AT4G08850 27.407 2.47e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1569 - - aprc:113862147 477.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1569 6 16967044 16968286 Tpr6g1569 6 16967044 16968286 ECH