Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1555 ATGGCTTTCGATTTGTTCTTTTGGCTTCTCATTTGTTTCCCTTTCAATATTGCTTTTTTGGCCTCAGCTTTCTACCAGGTTTTATTGTTGTCTGACTTAGAATCTGACTATGTAAACCCATATGATGCTTCATCAAAAATCAATTACTTTGTGGTTCCTGAGTTTATTGGTCAAGGGTTATTGTGTGCTCTTTTTCTCTTCACTGGTCATTGGTTCATGTTTCTTTTGATGCTTCCTCTTGCTTGCTATCATGTCAGGCTGTATGTTAAGCGGCAGCACCTCCTTGATGTTACTGAAGTGTTTAGGGTACTCAATGCTGAGAAGACATTTCGGATAGCCAAACTTGCTTTTTACCTAACAATGATTATTATAAATATCTTCAGGCTTGTATTAATCGTCGTCTTCTATTTCGATATGGATGATGAATGA 429 0.3706 MAFDLFFWLLICFPFNIAFLASAFYQVLLLSDLESDYVNPYDASSKINYFVVPEFIGQGLLCALFLFTGHWFMFLLMLPLACYHVRLYVKRQHLLDVTEVFRVLNAEKTFRIAKLAFYLTMIIINIFRLVLIVVFYFDMDDE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1555 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Tpr6g1555 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Tpr6g1555 142 PANTHER CORNICHON-RELATED 2 132 - -
Tpr6g1555 142 PANTHER PROTEIN CORNICHON 2 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1555 Tpr-Chr6 16843898 16850530 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1555 K20368 - gmx:100500341 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1555 6 16843898 16850530 Tpr6g1555 6 16843898 16850530 ECH