Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1551 ATGAAAGAAATTGACACGAGAAAAGGTTCAAAGAATATTCAAACTAAGAGTTCAAAAAGAACCGAAAGGAGAGAAAAGAAATTGCATCAAGATAATTCATCTAAAACATTGATTGAAAAAGGAAATGAATTTAAGACGGCCTCGGTGAATTCAGAAACTTATGAAAATCTAGTTATACATTATGTGGATGATGTCAACAGGTCTGAGGAGGCGCTTGTCGAGATGAAAGTTAATGAAGTGGTTGATAATCGTTCCACTGATTTGGAGAAAGAGCAAAAAGAAGGGTTTGAAGACGTATCAGATACTGACACAACAAAGGATTCAGTATCATCTCAAGGTGATTCTGTCACAAATGAAGATGAGAAAGTTGAGAAAGTTTCAAAAGAACCGAAAAGTAAGGTTAGAGTGAATTCTTTAGAAAACAATCGTGGAGCAAAGGAGAGATCTGATAGGAAAGGAAATAAACTGCAGTCAAAGGTATCAGGCAGCAATCAAAAGAAACCTACAAACTCAAATAAAACTCCTTCGAAAGTTACAAACAAAAATATGTCAACCAATTCCAAGACTGCAAAAGTTCCTGTTAAAGTTTCGTTGGAGTCATCTGAAGGAGTTGAAGTTGATGAAAAACCTGTTATAGAGGTCAAGGAAATTGAAATCTTGGATGGATCCTCCAATGGTGCTCACAGCATAGGAAGTGAAGATGAAAATCGTGAAACCGTTAATGCTGAAGAGAACAGTGAACGTGAGAAAGCAGTGGCGGCGGCATTGGAATTGAAAATTAAAGAAATGGAATCACGAATTGAAAATCTCGAAGAGGAACTGAGAGAAGTTGCTGCTCTTGAAGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCGGCACACAAGGTGCACACACCTGCTCGGCGCCTTTCTAGGCTCTATATACATGCTTGCAAGCATTGGACCACGAAAACAAAAGCAACGATAGCCAAGAATACTGTTTCTGGTCTTATTTTGGTTGCTAAATCTTGTGGTAACGATGTTTCAAGGTTAACTTTCTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTGCACAAGCATTTGGGAATGCATGTCAAGTTAGTCCCATTATGAGGTTGTCTGGGTCAAATGGATCTACCAAGAGGAATGATGGAAAGTCTGCATCACGGAAATGGAATGGTATCTCAAATGGTAAATCAGGAAATGGTTTTATGCAGAGTGGTGAAGATTGGCAGGAGACAGGAACCTTTGTATTTGCCTTAGAAAGAGTAGAATCATGGATCTTTTCTCGGCTAGTAGAGTCGGTATGGTGGCAGGCTTTGACTCCTTATATGCAATCTTCGGTTGGGGACTCGTGTTCAAATAAATCCATTGGGAGGCTTCTAGGACCTGCTCTTGGTGATCACAATCAAGGAAATTTTTCCATCAATCTTTGGCGAAATGCTTTCCAAGATGCTTTTCAACGACTCTGTCCTGTTCGAGCAGGAGGGCACGAGTGTGGTTGTTTGCCTGTGATGGCAAGAATGGTCATGGAACAGTGCATAGATAGACTCGATGTTGCAATGTTCAATGCAATTCTTCGGGAATCAGCTCTTGAGATACCAACTGATCCTATATCAGATCCGATTGTGGATTCAAAGGTTTTGCCAATTCCAGCAGGAAACTTAAGCTTTGGATCTGGTGCACAGCTAAAAAATTCCGTTGGAAATTGGTCTAGATTGCTCACTGATATGTTTGGCATTGATGCTGAAGATTGTCCGGAAGAATACCAGGAGAACGGTGAGAATGACGAAAGACAGGGTGGAGGTGGCGAACCTAAACCATTTGTTCTCCTTAACGACTTGAGTGACCTTCTAATGCTCCCAAAAGACATGCTTATGGATAGACAAGTCAGACAGGAGGTATGTCCTTCAATCAGTCTTTCATTGATTATACGCGTTCTCTGTAACTTCACTCCGGATGAGTTCTGTCCGGATGCTGTTCCAGGAGCCGTCTTGGAGGCCTTGAATGAAGAGACTATTGTGGACCGAAGATTGGCAGCAGAGTCCATAAGAAGCTTCCCTTATGCCGCGGCTCCAGTTGTGTATACACCTAGTTCGTCAGCCAATGTAGCCGAGAAAGTTGCAGAGGCAGGAGGAAAGTGTCACCTGACCAGAAATGTATCGGCTGTACAAAGGAGAGGATATACAAGTGATGAAGAGCTTGAAGAACTTGAATCGCCGCTTACATCTATCATTGATAAGCTTCCTTCATCTCCAACAGTTACTACTAATGGAAAGCAAGGGAGTCACGCCACCACAAATGCGAGATATCAACTACTTCGCGAAGTTTGGTCCATGTGA 2352 0.4167 MKEIDTRKGSKNIQTKSSKRTERREKKLHQDNSSKTLIEKGNEFKTASVNSETYENLVIHYVDDVNRSEEALVEMKVNEVVDNRSTDLEKEQKEGFEDVSDTDTTKDSVSSQGDSVTNEDEKVEKVSKEPKSKVRVNSLENNRGAKERSDRKGNKLQSKVSGSNQKKPTNSNKTPSKVTNKNMSTNSKTAKVPVKVSLESSEGVEVDEKPVIEVKEIEILDGSSNGAHSIGSEDENRETVNAEENSEREKAVAAALELKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTTKTKATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIIAQAFGNACQVSPIMRLSGSNGSTKRNDGKSASRKWNGISNGKSGNGFMQSGEDWQETGTFVFALERVESWIFSRLVESVWWQALTPYMQSSVGDSCSNKSIGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVMARMVMEQCIDRLDVAMFNAILRESALEIPTDPISDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCPEEYQENGENDERQGGGGEPKPFVLLNDLSDLLMLPKDMLMDRQVRQEVCPSISLSLIIRVLCNFTPDEFCPDAVPGAVLEALNEETIVDRRLAAESIRSFPYAAAPVVYTPSSSANVAEKVAEAGGKCHLTRNVSAVQRRGYTSDEELEELESPLTSIIDKLPSSPTVTTNGKQGSHATTNARYQLLREVWSM* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1551 783 MobiDBLite consensus disorder prediction 1 41 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 80 191 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 231 248 - -
Tpr6g1551 783 PANTHER NUCLEOLAR PROTEIN GAR2-LIKE PROTEIN 10 782 - -
Tpr6g1551 783 Coils Coil 246 280 - -
Tpr6g1551 783 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 10 782 IPR021827 GO:0005643
Tpr6g1551 783 MobiDBLite consensus disorder prediction 80 104 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 117 155 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 1 38 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 156 191 - -
Tpr6g1551 783 MobiDBLite consensus disorder prediction 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1551 Tpr-Chr6 16795958 16801802 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1551 - - gmx:100777738 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1551 6 16795958 16801802 Tpr6g1551 6 16795958 16801802 ECH