Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1544 ATGGCTATTGCAGCGGCTGCTGTTGTGGTTCCAGTTGGCCTGCTCTTCTTCGCTTCCGGCCTCATCGTTAATCTCATCCAGGCAATATGCTATGTCCTTATAAGACCGTTGTCAAAGAATTTGTACAGAAGGATCAATCGGGTGGTGGCAGAATTATTGTGGCTTGAACTTGTTTGGCTTATTGATTGGTGGGCTGGAGTTAAGGTCCAAATATTTACGGATCGCGAAACTTTTAATTTGATGGGTAAAGAACACGCACTTGTCATATGTAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGCAGTACTCTAGCAGTGATGAAGAAATCATCAAAGTTTCTACCGGTAATTGGCTGGTCGATGTGGTTTTCTGAGTATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAAAACACCTTGAAATCAGGTATAAAGCGGTTGAGCGATTTCCCTCTTCCGTTTTGGTTGGCTCTCTTTGTTGAAGGAACACGTTTTACACAGGTCAAACTATCGGCTGCTCAGGAATATGCAACCTCCACTGGATTGCCTGTTCCTAGAAACGTTTTGATTCCTAGAACTAAGGGGTTTGTTTCGGCTGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGATGTAACAGTGGCAATCCCCAAGAGTTCACCTGCTCCTACGATGCTAAGACTCTTACAGGGGAAACCTTCTGTGGTGCAAGTTCATATCAAGCGACATTTGATGAATGAATTACCAGAAAAAGATGAAGCTGTTGCTCAGTGGTGTAGAGATATATTTGTGGCCAAGGATGCATTGTTAGACAAACACGTAGCTGAGGATACTTTTAGTGATCAAGAGCTGCAGGACGCTCGTCGACCAATAAAGTCTCTTGTGGTAGCTCTATCTTGGGGTTTTGTGGTTGTTGCTGGCACTTTGAAGTTCCTACAATGGTCTTCGTTGCTATCATCATGGAAGGGTGTTGCATTTTCGACTTTTGGTTTGGCAGTTGTTACTGGCCTCATGCACATCTTGATTTTATTCTCACAGGCAGAGCGTTCAAACCCATCCAAGGTAGCCTCTGCAAAACGGAAGAACGAGGAGGAACAACCTTTGACTACAAACGGCAAACAACAATAG 1164 0.4407 MAIAAAAVVVPVGLLFFASGLIVNLIQAICYVLIRPLSKNLYRRINRVVAELLWLELVWLIDWWAGVKVQIFTDRETFNLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERSWAKDENTLKSGIKRLSDFPLPFWLALFVEGTRFTQVKLSAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPAPTMLRLLQGKPSVVQVHIKRHLMNELPEKDEAVAQWCRDIFVAKDALLDKHVAEDTFSDQELQDARRPIKSLVVALSWGFVVVAGTLKFLQWSSLLSSWKGVAFSTFGLAVVTGLMHILILFSQAERSNPSKVASAKRKNEEEQPLTTNGKQQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1544 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Tpr6g1544 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 39 286 - -
Tpr6g1544 387 MobiDBLite consensus disorder prediction 361 387 - -
Tpr6g1544 387 Pfam Acyltransferase 81 228 IPR002123 GO:0016746
Tpr6g1544 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Tpr6g1544 387 CDD LPLAT_LCLAT1-like 62 253 - -
Tpr6g1544 387 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
Tpr6g1544 387 SMART plsc_2 86 208 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1544 Tpr-Chr6 16694722 16701051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1544 3 377 Miscellaneous Gene Families AT3G57650 74.667 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1544 K13523 - gmx:100812696 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1544 6 16694722 16701051 Tpr6g1544 6 16694722 16701051 ECH