Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1522 ATGGGAGAAGCACCTGCATTTCTTGTTGAGGATCTTCAGGATGGACCTCTTAATGGTCTTGAATTGAAAAATGGAACTTGTAAAACAACTACTACCGTTGGCGATAAAACGTATGTCACTGTTGGAGCTGGTGATGGAACTTTGTCCATTGACGTTCAAATTTTTGACCGTAGTCTTGGAGAATGGGTTCACCCAACTGTGCTAGGCACCAAACCCTTGTCGTGCAAAGGTCACTCTGCTGTGCTTTGCGAAAACCGGATACTAGTTCTTAAGAAGGGTTCTAAATTGGATGATCAGATATGGTTCCTAGAGGTGGACACCGAATATGTTAGGCAGCAGCGAAAAAAGTTGGGCACTGAGGTTGTTGCGTGGAGTAAGGGTGTGATAGGCAATGCTGAAAAACCTATTGTTATTAGTGGTCCTTCTGGAGTTGGTAAAGGAACACTGATATCAATGCTCATGAAGGAATTCCCATCAATGTTTGGTTTTTCGGTGAGCCATACAACCCGTGCTCCAAGAAATATGGAGAAAGACGGGGTCCATTACCATTTTACCGATAAGAGTGTGATGGAGAAAGAGATTAAAAATGGAAAATTTCTTGAATTTGCATCTGTCCATGGTAATTTGTACGGGACCAGTGTTGAAGCTGTTGAAGTGGTAGCAGATGCAGGAAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAAATCTGTGAGGGCTAGTTCTCTTGAAGCCATATTCATCTTTGTCTCTCCACCATCAATGGAAGAGCTTGAGAAGCGCCTTCGTGACAGAGGGACTGAGACAGAAGAACAGATCCTGAAGCGACTGCGCAATGCCAAAGCTGAGATTGAGCAGGGGACATCTTCTAATATATTTGATTTCATGTTATACAATGACAAACTTGAGGAGTCTTATGAGAAACTTAAGAAATTATTGGGACTTGATGGTTTTGTCGCTGCTTCACCCAAATCAGCAGCACCTAAGGAGATTAATCTTCCAGTGGATCATTCAGTGTCTAAAATTGATGACAAAATCATCATCTCTTCGGGACTAGAGAAGGAGACAAAGAATTTGATCATGTTGGATGTTTCTTCACTAAAAGGCGGTGCACCAGGAAGGACAAGAGGGCTTGATTTTCAAGTCATAGGGGCCTCTTTGGATAAGCTTTGCTAA 1179 0.4224 MGEAPAFLVEDLQDGPLNGLELKNGTCKTTTTVGDKTYVTVGAGDGTLSIDVQIFDRSLGEWVHPTVLGTKPLSCKGHSAVLCENRILVLKKGSKLDDQIWFLEVDTEYVRQQRKKLGTEVVAWSKGVIGNAEKPIVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRNMEKDGVHYHFTDKSVMEKEIKNGKFLEFASVHGNLYGTSVEAVEVVADAGKRCILDIDVQGAKSVRASSLEAIFIFVSPPSMEELEKRLRDRGTETEEQILKRLRNAKAEIEQGTSSNIFDFMLYNDKLEESYEKLKKLLGLDGFVAASPKSAAPKEINLPVDHSVSKIDDKIIISSGLEKETKNLIMLDVSSLKGGAPGRTRGLDFQVIGASLDKLC* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1522 392 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Tpr6g1522 392 PANTHER GUANYLATE KINASE-RELATED 1 328 - -
Tpr6g1522 392 Gene3D - 129 317 IPR027417 -
Tpr6g1522 392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Tpr6g1522 392 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Tpr6g1522 392 SMART gk_7 132 318 IPR008145 -
Tpr6g1522 392 Hamap Guanylate kinase [gmk]. 131 318 IPR017665 GO:0004385|GO:0006163
Tpr6g1522 392 Pfam Guanylate kinase 133 314 IPR008145 -
Tpr6g1522 392 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 328 - -
Tpr6g1522 392 CDD GMPK 135 311 - -
Tpr6g1522 392 SUPERFAMILY Galactose oxidase, central domain 27 109 IPR011043 -
Tpr6g1522 392 TIGRFAM guanyl_kin: guanylate kinase 134 314 IPR017665 GO:0004385|GO:0006163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1522 K00942 - gmx:100808931 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1522 6 16488464 16492195 Tpr6g1522 6 16488464 16492195 ECH