Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1511 ATGGATGCATTTGTCCTCTTCGGCTTGGCGGAGTCACTGATAACAAAGCTTGCTTCTCGGGCATTTGAAGAAGCTTGTCAGGTGCGGGATCTATATGTAGATCTTCAACAGTTCACACAGACTATTTCTTACATCAAATCTGTGTTGTTGGATGCTGACCAAAAGCAGAAGAAGCAAACCTTCTATGATGGCTTTGAGCTGAAGAATTGGTTGTGGCTAGTAGGAGTTGTCCTCTCTGATGCTGAAAATGTGCTTGATGAAATTGAGTTTCAGAACCTGCGAAAGAAAGTGATCAAAGATAATGGTGGCAGAATCTTAACCAAGATAATTGATATTCGAAATGACACGCATTTAGCACATAGGGGAGAAATGACATACTCCCGTGTGATTAATTCAGAAGTGATAGGAAGGGAACATGATAAAAAAAAGATCATAGATCTTTTAATTCAGCATGGTAATGATGAAAATCTATCTGTTATTCCTATAGTTGGGCTTGGTGGCCTCGGAAAGACCACACTTGCAAAGTTTGTGTTTAATGATGAAAAGATAAGTAGGAATTTCTCATTCAAGATGTGGGTGTGTGTTGCAGATTTTTATAGCTTTGACATTAAGGAAATAATTATTAAGATTATTAATTCTGCTAATGACTCTCCTAAAGGGGACGCTCCTACTTACCAACAAAATTATAGAGATTTAGATATTGAGCAACTGCAGAATCATCTTATAAACAAACTTAATGGTCAGAAGTTTCTACTAATCGTAGACGATGTGTGGGTTGTAGATCGTGTTAAATGGATTCAGGTGAGGGATTTAATACAAGTAGGTGCTCTAGGAAGTAAAATCATAGTTACTACACGTAATAACTCAGTTGCTTCCGTGATGGGAACCGTTTCCCCACACATTTTAGAAGGCCTTTCTCTGGAGGATTCATTATCTTTATTTGTCAAATGGGCCTTTAAAGAAGGAGTAGAGAGAAGGTATCCACAGTTGGTAAATATTGGGAGGGAAATTGTGAAAAAATGTGGTGGACATCCCTTGGCAGTGAGAACAGTAGGGGGTTTACTTTTTTCAAAATATGACTCAGTTGGGTTTTGGGAAAACGTCAGAGACAACGAAATTTGGAATTTACCAGGCACAGATGAGATTTTATCGGCGCTTAAGTTAAGCTATGCTCAAATGCCATCTGATATGAAGAAATGCTTTGCTACATTGTCTCTTTACCCAAGGGGTCATACATTTGATAGTTTTCATGTAACATCGCTATGGAGAGCACTTGGTCTCCTTCCAGCACCAAACGGTAACCAAAATCAAACATTGAAATATAGTGCTAACCATTATTTGTATGAACTGTTGTCAATATCTTTTCTTCAAGATTTTGTCGACTATGGCATTGGTTTTGCATTCAAAATAGATGATTTGGTGCATGAACTTGCTTCGTCAGTTGCAAGAGACTGCCTTCTAGCATATCACCCTAATCATTTCATGCTTGACAATGCCCAACATCTGTCTTTCCCTGAAAACCTACTGCTTGACGTATTTCCCATTGAAAAGTTTAAATATGTGAAGAGCATACTATTTCCTACAGCTGGAGTTGGACCAAACAGTAGAGATTTCTTGAATGCATGCACGTCAATTTATAAACACCTGCGATTTTTGGATTTAAGTGACTCTATGTATGAGACTTTGCCTAGGTCCATTGGCAACCTGAAACATTTAAGATATCTCAGTCTTGAGAATAATAGAAATATTAAGAAACTTCCGGATTCTATATGCAACCTTCTGATGTTAGAAATGTTGATACTCAGTGGATGTACAGAACTTGAAACACTTCCTAAAGGTTTAAAAAATTTGATCAGTCTCCAACAGTTGGAAATAACAACAAAGCAGTGTGTTTTACCTGAGGACGAGATTGCAAATCTGAGTTCTCTTCAGACTCTCAGAATCGAGTTTTGCAGCAATCTAGAGTCATTGTTTGGAGGGATAAAAAAGCTCCCTGTTCTTAGAGTATTGTGTGTTGCTAACTGTAGAAGTTTAAAGACTTTGCCACTTGATATTGAACATTTTCCTGCATTAGAGACTTTGCTAGTGGACAACTGTGACTTATTGGAATTTCCAGAGGGACACGAGGACCAAAACTCAAGCATGAGATTGAAGGTTGTAACTATTGTTTCTCTGGATCAGTTGGTGACATTGCCTCTTTGGCTTCGAGGGTCTGTGAATACATTACAATACTTGTCAATTTCAAGCTGCAACAATCTTGTGGCACTTCCACAGTGGCTGTCAGGTATGAACTATCTGAAAACATTATGTATCACAGGTTGTCCTAATGTAATGTCTCTCCCCAATGACATTCATTGCCTCCCCAGTCTCGAACGATTTGAAATCGATGGCTATCCTGAATTGCATAGAAAATCTCAGCTGGAAGTTGGAGAGTCTTCCCGCACACCCAATGGCATTGATGAACCAGATGAAATAGAAGAAGATTTGGAATAA 2493 0.3851 MDAFVLFGLAESLITKLASRAFEEACQVRDLYVDLQQFTQTISYIKSVLLDADQKQKKQTFYDGFELKNWLWLVGVVLSDAENVLDEIEFQNLRKKVIKDNGGRILTKIIDIRNDTHLAHRGEMTYSRVINSEVIGREHDKKKIIDLLIQHGNDENLSVIPIVGLGGLGKTTLAKFVFNDEKISRNFSFKMWVCVADFYSFDIKEIIIKIINSANDSPKGDAPTYQQNYRDLDIEQLQNHLINKLNGQKFLLIVDDVWVVDRVKWIQVRDLIQVGALGSKIIVTTRNNSVASVMGTVSPHILEGLSLEDSLSLFVKWAFKEGVERRYPQLVNIGREIVKKCGGHPLAVRTVGGLLFSKYDSVGFWENVRDNEIWNLPGTDEILSALKLSYAQMPSDMKKCFATLSLYPRGHTFDSFHVTSLWRALGLLPAPNGNQNQTLKYSANHYLYELLSISFLQDFVDYGIGFAFKIDDLVHELASSVARDCLLAYHPNHFMLDNAQHLSFPENLLLDVFPIEKFKYVKSILFPTAGVGPNSRDFLNACTSIYKHLRFLDLSDSMYETLPRSIGNLKHLRYLSLENNRNIKKLPDSICNLLMLEMLILSGCTELETLPKGLKNLISLQQLEITTKQCVLPEDEIANLSSLQTLRIEFCSNLESLFGGIKKLPVLRVLCVANCRSLKTLPLDIEHFPALETLLVDNCDLLEFPEGHEDQNSSMRLKVVTIVSLDQLVTLPLWLRGSVNTLQYLSISSCNNLVALPQWLSGMNYLKTLCITGCPNVMSLPNDIHCLPSLERFEIDGYPELHRKSQLEVGESSRTPNGIDEPDEIEEDLE* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1511 830 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 7 753 - -
Tpr6g1511 830 Pfam Rx N-terminal domain 11 97 IPR041118 -
Tpr6g1511 830 SUPERFAMILY L domain-like 471 797 - -
Tpr6g1511 830 Gene3D - 123 299 IPR027417 -
Tpr6g1511 830 Gene3D Ribonuclease Inhibitor 482 710 IPR032675 -
Tpr6g1511 830 PANTHER DISEASE RESISTANCE PROTEIN RP 7 753 IPR044974 GO:0006952
Tpr6g1511 830 Gene3D Ribonuclease Inhibitor 715 813 IPR032675 -
Tpr6g1511 830 PRINTS Disease resistance protein signature 159 174 - -
Tpr6g1511 830 PRINTS Disease resistance protein signature 244 258 - -
Tpr6g1511 830 PRINTS Disease resistance protein signature 341 355 - -
Tpr6g1511 830 PRINTS Disease resistance protein signature 638 654 - -
Tpr6g1511 830 Gene3D - 304 388 IPR042197 -
Tpr6g1511 830 Gene3D - 10 121 - -
Tpr6g1511 830 Pfam NB-ARC domain 138 390 IPR002182 GO:0043531
Tpr6g1511 830 MobiDBLite consensus disorder prediction 805 830 - -
Tpr6g1511 830 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 403 IPR027417 -
Tpr6g1511 830 Gene3D - 389 480 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1511 Tpr-Chr6 16352020 16355082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1511 547 795 Receptor kinase-like Gene Family AT3G23110 26.275 2.64e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1511 - - gmx:121174109 915.22