Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1510 ATGATGTCTTTGGTTGGATCGTTCCTCTTCAGCATGGCAGAGTCACTCATAGCACAACTTGCTTCTCAGGCATTAGTAGAAGCTTCTCAGGTGCTTGGTGTTTACAACGATCTTCAACACTTCACACAAACTCTCTCATACATCAAAGCTGTGTTATTGGATGCTGAACAAAAGCAAAATCATGATTATCAAAATTTTGAGCTAAGTGAATGGTTGTGGCTGGTTAGAGATGTCTTATCTGATGCAAAAAATGTGCTGGATGAAGTTGAGTTCGAAAACTTACGGAAGAAAGTGATCAAAGCGCATAGCAGCAGCAGAAACATGATAATAACCAAGGTAAATAACTTCTTCTCCAGTTCTAATCCACTTGTTTTTCGATTTAGGATGGCACGGAAAATGAAACAAATAAACACGAGATTAGATAAGATTGCTGCTGATAGGCACAAGTTTGGTTTTAGTATAGTTGATGCTGACAACCATATTGTGCATAGGAGAGAACTTACATACTCGAGTGTGATTGATTCAGAAGTGATAGGAAGGGAACGTGATAGGGAAAAGATCATAAAACTTTTGATTCATCGTGATAATAACAAAAATCTCGCTATCGTTCCCATTGTGGGGCTTGGAGGTGTGGGAAAGACCTCACTTGCAAAGCTTGTGTTCAATGATGAAAGGATTGATGCGTATTTTCCATTGAAAATGTGGGTGTGTGTTTCGGGAAGCTTTGATATTAAGCAAGTGATTATTAAAATCATCAGTTCTGCTAATGAATCTATTGATGCAACTACTTACCGACAAAATTTAAGAGATTTGGATATCCAGCAGCTACAAAATCATCTTAAAAGTAAGCTTAAATGTCAAATGTTTCTACTCGTCTTGGACGATGTGTGGAATGAAGATCGTGTTAAATGGGTTGAGTTGAAGGATTTAATACAAGTAGGCGCGGTTGGATGTCAACTCTTAGTGACTACACGTAATCACTCGATTGCTTCCATGATGGGCACCATTCCCTCTCACATATTAGTAGGCCTTTCCCTGGAGGATTCTTTGTTAGTTTTTGTCAAATGGGCATTTAAAGAAGGGGAAGCGAAAAAGTATCCACATTTGGTAGATATTGGGCGAGATATTGTGAAAAAATGTGGAGGAATACCTTTGGCATTGAGAACATTAGGGAGTTCACTATTTTCAAAATACGATACAGATGAGTGGGAATGCGTAAGAGACAACCAAATTTGGAACTGCCACATTCGGAATGCAGAAGACACGGGCAACATTTTACATGCACTTAAGTTAAGCTATTATCAAATGCCGTGCTATCTCAAGGAATGTTTTGCTTTGTTCTCCCTTTACCCAAAGGACCATGCATTTGATAGTTTTGATATAGCATCCCTTTGGAGAGCACACGATCTCCTTCCACCACCGATCATAAATCAAACAATGAAATACAGTGCTAACCAGTTCTTGTTTGAATTATTGTCAATATCTTTCCTTCAAGACTTCATCGACTATGGTATTGGTTTTTCTTTTAAAATGCACGATCTAGTTCATTCTTGTGCTGCAAGAATTGCACTGGTAGAATGCAAACTTGTAACGGATTCCATTGAAGGAAGGCGCAGGGTCTTTGTTCGACATCTGTCTTTCCCCGAAAACAAAGGACTTGACAAATTTCCCATTCAAAGATTTAAAAAACTGAGAAGCATACTATTTCCGACTGCTGGAATTGGAGCCAACAGTGATGCTTTCTTGGTTGCGTGCACGTCAAGCTGCAAACATCTACGATTTTTGGATTTAAGTGATTCTACGTATGAGACCTTGCCTCAGTCCATTGGCAAGTTGAAACATTTAAGATATCTCAGTCTTGAGAATAATAGGAATCTTAAGAGACTTCCTGATTCTATTTGCAACCTTGTAATGTTAGAAATGTTGATACTTAGTGGATGTACTGAACTTGATACACTGCCTAAGGGTTTGAGAAAACTGATCAGTCTCCAACATTTGGAGATAACAACAAAGCAGTTTGCTTTACCTGAGGATGAGATTGCAAACTTGAGTTCTCTTCAAACTCTCAGAATCGAGTTTTGCAACAATCTTGAATCACTGTTTGGAGAGATAAAACTCCATGCTCTCAAAGTATTGTGTGTTGCTAATTGCAGGAATCTAAAGTCGTTGCCACTTGATATTGAACATGTTCCTGCATTAGAGACTCTTCTAGTTGACAACTGTGACACATTGGAATTTTCAGAGGGATGTGAGGACCAAATCTCCGACATGAGGTTGAAGGTTCTAACAATTGTTTCTCTGCACCAGTTGGTGACTTTGCCTCATTGGCTTCAAGGGTCCGTGAATACATTACAATACCTGTCAATTTCAAGCTGCAACAATCTTGTGGTACTTCCTCAGTGGCTTTCAGCTATGAATTGTTTGAAAACAATTTGTATCACAGGTTGTCCTAATATAATGTCTTTTCCCAATGACATTCATCGCCTCGCCACCCTCGAACGATTGGAAATTGATGGTTATCCTGAATTACTTAGAAAATCTCAGCAGGAAGTTGGAGAGTCTTCTCACACACACAGTACCACTAACGAGCCAGATGAAGTGGAAGAAGAACTGGAGTGA 2619 0.3914 MMSLVGSFLFSMAESLIAQLASQALVEASQVLGVYNDLQHFTQTLSYIKAVLLDAEQKQNHDYQNFELSEWLWLVRDVLSDAKNVLDEVEFENLRKKVIKAHSSSRNMIITKVNNFFSSSNPLVFRFRMARKMKQINTRLDKIAADRHKFGFSIVDADNHIVHRRELTYSSVIDSEVIGRERDREKIIKLLIHRDNNKNLAIVPIVGLGGVGKTSLAKLVFNDERIDAYFPLKMWVCVSGSFDIKQVIIKIISSANESIDATTYRQNLRDLDIQQLQNHLKSKLKCQMFLLVLDDVWNEDRVKWVELKDLIQVGAVGCQLLVTTRNHSIASMMGTIPSHILVGLSLEDSLLVFVKWAFKEGEAKKYPHLVDIGRDIVKKCGGIPLALRTLGSSLFSKYDTDEWECVRDNQIWNCHIRNAEDTGNILHALKLSYYQMPCYLKECFALFSLYPKDHAFDSFDIASLWRAHDLLPPPIINQTMKYSANQFLFELLSISFLQDFIDYGIGFSFKMHDLVHSCAARIALVECKLVTDSIEGRRRVFVRHLSFPENKGLDKFPIQRFKKLRSILFPTAGIGANSDAFLVACTSSCKHLRFLDLSDSTYETLPQSIGKLKHLRYLSLENNRNLKRLPDSICNLVMLEMLILSGCTELDTLPKGLRKLISLQHLEITTKQFALPEDEIANLSSLQTLRIEFCNNLESLFGEIKLHALKVLCVANCRNLKSLPLDIEHVPALETLLVDNCDTLEFSEGCEDQISDMRLKVLTIVSLHQLVTLPHWLQGSVNTLQYLSISSCNNLVVLPQWLSAMNCLKTICITGCPNIMSFPNDIHRLATLERLEIDGYPELLRKSQQEVGESSHTHSTTNEPDEVEEELE* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1510 872 SUPERFAMILY L domain-like 510 840 - -
Tpr6g1510 872 Gene3D - 13 134 - -
Tpr6g1510 872 PANTHER OS08G0543100 PROTEIN 22 826 - -
Tpr6g1510 872 PRINTS Disease resistance protein signature 202 217 - -
Tpr6g1510 872 PRINTS Disease resistance protein signature 283 297 - -
Tpr6g1510 872 PRINTS Disease resistance protein signature 380 394 - -
Tpr6g1510 872 PRINTS Disease resistance protein signature 681 697 - -
Tpr6g1510 872 Gene3D - 344 431 IPR042197 -
Tpr6g1510 872 Pfam NB-ARC domain 181 433 IPR002182 GO:0043531
Tpr6g1510 872 Pfam Rx N-terminal domain 14 104 IPR041118 -
Tpr6g1510 872 Pfam Leucine rich repeat 591 647 IPR001611 GO:0005515
Tpr6g1510 872 Gene3D - 161 338 IPR027417 -
Tpr6g1510 872 Gene3D Ribonuclease Inhibitor 754 860 IPR032675 -
Tpr6g1510 872 Gene3D Ribonuclease Inhibitor 527 753 IPR032675 -
Tpr6g1510 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 446 IPR027417 -
Tpr6g1510 872 MobiDBLite consensus disorder prediction 846 872 - -
Tpr6g1510 872 Gene3D - 432 521 IPR036388 -
Tpr6g1510 872 PANTHER DISEASE RESISTANCE PROTEIN RP 22 826 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1510 Tpr-Chr6 16346623 16349882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1510 576 837 Receptor kinase-like Gene Family AT3G23110 27.599 5.17e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1510 - - gmx:121174109 1070.07