LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g1506	ATGACCGAAAAATTTATCTTTGATATTGCTAATTCACTCCTAGGGAAGCTTGGTTCCTATGCTTTTGAAGAAGCTTCTCGTGCCTATGGTCTGTATGAAGATCTCCAACGGATCAAAGACACTTTGTCAATTGTCAGAGGTCTGCTGTTGGATGCTGAGGAGAAGGAAAATAAGCATGGGGTGCAAGAATGGCTGAGGCAGATTCATAACATATGCTCTGATGCTGAAAATATATTCGATGGATTTGAGTTGCAACACAAGCGAAAACAAGTTGTTGAAGCTTCTGGTAGCACCGTGATGAAGGTAAGCTACTTGTTTTCTTCCTCTAGTCCACTTGCTTTCCGTTTTAGGATGGCACAGCAAATCAAAGAGATTAGGGATAGATTGGATAAGGTGGCAGCTGACGGGACCAGGTTTGGTCTTGCAACAATCAGTATTGATTTAGGACTTGTTGTGCATAGGAGAGAAATGACTCATTCCCATGTTGATGCTTCAGATGTGATAGGAAGGGAGAATGATAGGGAAGAAATTATCAAGCTTTTGATGCAGCCCCATCCTCAGGGTGATGGTGATGGTGATAAAAGTTTGTGTGTTATTCCCATAGTGGGAATTGGAGGATTGGGGAAGACCACACTTGCTAAGTTGGTGTTCAATGATAAGAGGGTGGATGATCTTTTCCAATTGAAGATGTGGGTGTGTGTTTCTGATGAATTTGACATTAAGCAAATAATTATTAAAATCATCAACTCTGCTTATGCTTTACCTTCAGCTTCGACGGCGGCTCTTGCTCACCAAGAAAACATTAACAATTTAGATATTGAGCAACTACAAAGTCGTCTTCGATATAAGCTTTCTGGTCAAAAGTTTTTGCTTGTATTGGATGATATATGGAATGAAGATCGTGCAAAATGGATTAAATTAAAAGAATTAATAAAGGGTGGTGCACGAGGAAGCAAAATCATAGCAACAACACGTAGTAACTCAATTGCTTCAATGATGGGTACTTTCCCCTCATATGTTTTAGAGGGCCTTTCTCAAGATAATTGTTTATCTCTTTTCCTCAAATGGGCATTTAAAGAAGGTGAAGAAGAAAAATATCCAAATCTAGTGGAGACCGGAAAAGAAATTGTGAGAAAATGTCGAGGGGTTCCACTAGCAGTGAGAACATTAGGAAGTTCCTTGTTCTTAAAATTTGATTTAAATAAGTGGATATTTGTTAGAGACTCTGAAATATGGAATTTAAAACAAAATGAAGATGACATTTTACCTGTGCTTAAGTTAAGCTATGATCAAATGCCATCTCATTTGAGGCATTGCTTCACATACTTTTCCATTTATCCAAAAGATTTTGGCTTCACTAGTGTTCAAATCACTAAACTCTGGATGGCACTGGGATTACTACAATCAAAAGATGGCAATCAAACACCAGAGAATATTGCAAGAGATTATATTGATGAGTTACATTCAAGGTCATTTCTTCAAGATTTTGAGGACTTCGGCCATTTCTACTATTTCAAAGTACACGATTTGTTGCATGATCTTGCATTGTATGTTGCGAAAGATGAGTGTGTAGTAGTAGACTCACATACTCGGAATATATCTGAGCAAGTAAGGCATTTTTCAATTGTTGAAAATGGTTCACTTGACAGTGATTTATTCCCCAAGACCAGAAGTGTGAGAACTATACTATTTCCCATTGAAGGAGTGGGTCTTGAAAGTAAATCTATGTTGGATACATGGGTATTAAGATGCAAATACTTACGGTTTTTAGATTTAAGTGATTCTTCATTTGAGACTCTGCCTAATTCAATCACTAAATTGAAGCACTTACGTGTTCTCAACCTTTCTAATAACCGTAAAATCAAAAGACTTCCCCATTCTATTCACAAACTCCAAAGTTTGGAAGTTTTGTCACTCAGTGGTTGCATGGAGTTTGAAACATTGCCTAAAGAATTAGGTAACTTGATCAGCCTTCGGCAACTGTATATAACTACGAAACAGTCTGTGATATCACAGAATGTATTTGCAAACTTGACCAATCTTCAAACTTTGTGTTTTGAATATTGTGACCGTTTGGAGTTGTTGTTCGATAGGGTACAATTTACTTCTCTTGAAACATTGATTGTTCGTTCTTGTGGAAGTATTATATCTTTACCTTTATATATTCTCCCAAGATTGGAGGCTCTGTTAGTCATTGATTGTAAGAGTTTAGACCTCAGCCCACCAGAGAATCACACTCTTCAAAATCCAACCGGAATATGGAAAATGACTTTTCTTCATCTTCAGAATGAAACCCCATGGCTATGGACTTTGCCTAAATGGATTGAAGGAGTTGTTGAGACTTTACAGACCTTGATACTTATAAATTTGTATGAACTTAGGATGCTTCCAGAGTGTTTGACAAGAATGACTCGTCTTAAAATGCTCCATATCGCTGACTGTCCTCTTTTGTATTATCTTCCAAGTGGCATGCAGCAACTCACTGCCCTTGAAGCTTTGACTATAGATGGTTGTCCTAAATTATGTCAACAATGTCAGCCACATGCCGGTGAGTACTGGCCCATGATTTCTCACATTAAATGTGTTTCCATTGGAGAACCAGGAGTGGAGGAACCTCAGGAAGGACGGGTCTTTAGCTCCCCTGATCTACCGTCCCTTTGGAAAGGTAATGATGAGCCTAGAGTCAACCATAGAAGAGGGAGATGA	2706	0.3836	MTEKFIFDIANSLLGKLGSYAFEEASRAYGLYEDLQRIKDTLSIVRGLLLDAEEKENKHGVQEWLRQIHNICSDAENIFDGFELQHKRKQVVEASGSTVMKVSYLFSSSSPLAFRFRMAQQIKEIRDRLDKVAADGTRFGLATISIDLGLVVHRREMTHSHVDASDVIGRENDREEIIKLLMQPHPQGDGDGDKSLCVIPIVGIGGLGKTTLAKLVFNDKRVDDLFQLKMWVCVSDEFDIKQIIIKIINSAYALPSASTAALAHQENINNLDIEQLQSRLRYKLSGQKFLLVLDDIWNEDRAKWIKLKELIKGGARGSKIIATTRSNSIASMMGTFPSYVLEGLSQDNCLSLFLKWAFKEGEEEKYPNLVETGKEIVRKCRGVPLAVRTLGSSLFLKFDLNKWIFVRDSEIWNLKQNEDDILPVLKLSYDQMPSHLRHCFTYFSIYPKDFGFTSVQITKLWMALGLLQSKDGNQTPENIARDYIDELHSRSFLQDFEDFGHFYYFKVHDLLHDLALYVAKDECVVVDSHTRNISEQVRHFSIVENGSLDSDLFPKTRSVRTILFPIEGVGLESKSMLDTWVLRCKYLRFLDLSDSSFETLPNSITKLKHLRVLNLSNNRKIKRLPHSIHKLQSLEVLSLSGCMEFETLPKELGNLISLRQLYITTKQSVISQNVFANLTNLQTLCFEYCDRLELLFDRVQFTSLETLIVRSCGSIISLPLYILPRLEALLVIDCKSLDLSPPENHTLQNPTGIWKMTFLHLQNETPWLWTLPKWIEGVVETLQTLILINLYELRMLPECLTRMTRLKMLHIADCPLLYYLPSGMQQLTALEALTIDGCPKLCQQCQPHAGEYWPMISHIKCVSIGEPGVEEPQEGRVFSSPDLPSLWKGNDEPRVNHRRGR*	902

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr6g1506	901	Pfam	NB-ARC domain	192	430	IPR002182	GO:0043531
	Tpr6g1506	901	Pfam	Leucine rich repeat	587	642	IPR001611	GO:0005515
	Tpr6g1506	901	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	151	442	IPR027417	-
	Tpr6g1506	901	Pfam	Rx N-terminal domain	11	97	IPR041118	-
	Tpr6g1506	901	Gene3D	-	343	428	IPR042197	-
	Tpr6g1506	901	PRINTS	Disease resistance protein signature	198	213	-	-
	Tpr6g1506	901	PRINTS	Disease resistance protein signature	283	297	-	-
	Tpr6g1506	901	PRINTS	Disease resistance protein signature	380	394	-	-
	Tpr6g1506	901	PRINTS	Disease resistance protein signature	629	645	-	-
	Tpr6g1506	901	ProSiteProfiles	Leucine-rich repeat profile.	609	631	IPR001611	GO:0005515
	Tpr6g1506	901	CDD	RX-CC_like	11	133	IPR038005	-
	Tpr6g1506	901	PANTHER	NBS-LRR DISEASE RESISTANCE PROTEIN	6	739	-	-
	Tpr6g1506	901	Gene3D	Ribonuclease Inhibitor	551	859	IPR032675	-
	Tpr6g1506	901	Gene3D	-	151	336	IPR027417	-
	Tpr6g1506	901	MobiDBLite	consensus disorder prediction	873	901	-	-
	Tpr6g1506	901	Gene3D	-	429	517	IPR036388	-
	Tpr6g1506	901	PANTHER	DISEASE RESISTANCE PROTEIN RP	6	739	IPR044974	GO:0006952
	Tpr6g1506	901	SUPERFAMILY	L domain-like	506	868	-	-
	Tpr6g1506	901	Gene3D	-	10	128	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g1506	Tpr-Chr6	16302060	16306348	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g1506	587	735	Miscellaneous Gene Families	AT4G39270	30.189	3.20e-08	55.5

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g1506	-		-	gmx:100794422	1171.76