Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1483 ATGGCGGCATTGAAAGGATTGTTGAAGAAAGGTTTAGGAGAAATGGACTTCAACGCCGGTGGAGGACTCATCAACTGGTTTCCAGGACACATGGCAGCCGCCACACGTGCCATCCGTAACCGTCTTAAACTTGCCGACCTCGTTATCGAAGTCAGAGACGCTCGTATCCCTATTTCCTCCATCAATTCCGATCTTCAATCTCATCTTTCATTGAAACGGCGCGTCATTGCACTCAACAAAAAAGACTTAGCTAACCCTAACATCATGCATAAATGGGTGAATTATTTTGAGACGTGTAAGCAAGATTGTATTCCTATAAATGCTCATAGTAAGAGTTCTGTTACTAAGCTTCTGGAACTTGTGGAGTTGAAGTTGAAGGAAGCGATTTTGAAGGAACCTACTTTACTTGTTATGGTGGTTGGTGTTCCTAATGTTGGAAAATCTTGTTTGATTAATTCTATTCATCAAATTGCGCAATCTCGTTTTCCTGTGCAGGAGAAGAATAAGCGAGCTGCTGTGGGTCCACTGCCTGGTGTTACTCAAGATATTGCAGGATTTAAGATAGCAAACAAACCGAGCATATACGTCCTAGATACCCCAGGAGTTCTTGTTCCAAGTATTTCAGACATAGAGACGGGGTTAAAGCTTGCTCTTGCAGGGTCTGTTAAAGATTCAGTGGTGGGTGAGGAGCGTATTGCTCAATACTTATTGGCAGTTTTAGATACCCGGGGTACTCCACTTCACTGGAAACACCTACTAAATAACAGGAGGATAGATGGGATTTCATATGATGAAGAAAATAATCGATATAACTTGAAAACTCTTAAGCAAAGGAGAAGTTCGCCTAATAGATCTGACTTGGTATACGTAGAGGATATTGTGTTGGGAGTTCAGCATGCACTCTATTCAACTCTAGCAGAATTCAATGGCAATGTAGAAGATGAGGGAGACTTGGAGAACCTGATTGACGAACAGTTTGGTGCACTGCAGAAGGCATTGAAGATACCTCACAAGGCTTCAGAAGCACGGTTGATGGTATCCAAAAAGTTCCTTACTTTATTCAGAGCTGGTAAACTAGGACCTTTTATTCTTGACGATGTCCCCATCGCCAAACCTGTGTAA 1122 0.4234 MAALKGLLKKGLGEMDFNAGGGLINWFPGHMAAATRAIRNRLKLADLVIEVRDARIPISSINSDLQSHLSLKRRVIALNKKDLANPNIMHKWVNYFETCKQDCIPINAHSKSSVTKLLELVELKLKEAILKEPTLLVMVVGVPNVGKSCLINSIHQIAQSRFPVQEKNKRAAVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYLLAVLDTRGTPLHWKHLLNNRRIDGISYDEENNRYNLKTLKQRRSSPNRSDLVYVEDIVLGVQHALYSTLAEFNGNVEDEGDLENLIDEQFGALQKALKIPHKASEARLMVSKKFLTLFRAGKLGPFILDDVPIAKPV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1483 373 Gene3D - 24 203 IPR027417 -
Tpr6g1483 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 23 370 - -
Tpr6g1483 373 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 35 205 IPR030378 GO:0005525
Tpr6g1483 373 CDD YlqF 26 203 - -
Tpr6g1483 373 PANTHER SHORT INTEGUMENTS 2, MITOCHONDRIAL-LIKE 23 370 - -
Tpr6g1483 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 218 IPR027417 -
Tpr6g1483 373 Pfam 50S ribosome-binding GTPase 137 250 IPR006073 GO:0005525
Tpr6g1483 373 Gene3D - 208 358 IPR023179 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1483 Tpr-Chr6 15989962 15997002 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1483 K19828 - gmx:100801130 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1483 6 15989962 15997002 Tpr6g1483 6 15989962 15997002 ECH