Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1464 ATGATTACAAACTTGTTCTATGTGGTTTTCTTAGTAATCATTATTTGTTCATCTTCTTTTCTAATATCAGTCTCTCATTCTGATGGTGAGGTTGAATACAACTACAAAAGTGGAGATAGTAAAGGACCAGAGAATTGGGGGAAGATAAAACCAGAATGGAAACTTTGTGGGATTGGAAAATCACAATCTCCAATTGATATCCTAAATAATATGGTGCAAGAACTCCCTGAACTTGGTAAACTTGAAAAAAATTACAAACCAGCCCCCGCTGTTCTAAAGAACAGGAGTCATGATGTCAAGCTCGTATGGAATGGTGATGCAGGGAAGTTTGACATAAAGGGAATCTCCTACAAACTAGTAAATTGTCATTGGCATATACCTGCAGAGCACACTTTGAATGGAACAAAGTTTGATATGGAACTACATGCAGTTCATCAAAACTCTAAAGGAGAGATAGCTGTTATTGGAATATGGTATAAAATTGGAGGTCAAGATTCCTTCCTTTCAAAGTTGCTTGAAAAAATAAAGTTAATTGGTGACAAGGATATGGATATAGGAAAAATTAACCCAAAAAAAATCAAGTTTGGAAGCAAAAATTATTACAGATATATTGGTTCTCTTACAACTCCACCATGTACTGAAGGTGTTATTTGGACAGTGCTGCAAAAGGTGAGGACAGTCTCGAGTGAACAACTAAAGGTTTTGAAAGAAGCTGTTCATCCTGGATTTGAGGAAAATGCAAGGCCAACTCAGGATCTTGGTGAAAAACAAGTTTTTTCATATAATTCTAAAAAGAAAGTAGTACAAGAATAA 813 0.353 MITNLFYVVFLVIIICSSSFLISVSHSDGEVEYNYKSGDSKGPENWGKIKPEWKLCGIGKSQSPIDILNNMVQELPELGKLEKNYKPAPAVLKNRSHDVKLVWNGDAGKFDIKGISYKLVNCHWHIPAEHTLNGTKFDMELHAVHQNSKGEIAVIGIWYKIGGQDSFLSKLLEKIKLIGDKDMDIGKINPKKIKFGSKNYYRYIGSLTTPPCTEGVIWTVLQKVRTVSSEQLKVLKEAVHPGFEENARPTQDLGEKQVFSYNSKKKVVQE* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1464 270 CDD alpha_CA_prokaryotic_like 42 258 IPR041891 -
Tpr6g1464 270 ProSiteProfiles Alpha-carbonic anhydrases profile. 31 262 IPR001148 -
Tpr6g1464 270 SUPERFAMILY Carbonic anhydrase 32 259 IPR036398 -
Tpr6g1464 270 Pfam Eukaryotic-type carbonic anhydrase 42 261 IPR001148 -
Tpr6g1464 270 PANTHER ALPHA CARBONIC ANHYDRASE 4-RELATED 6 264 - -
Tpr6g1464 270 PANTHER CARBONIC ANHYDRASE 6 264 IPR023561 GO:0004089|GO:0008270
Tpr6g1464 270 SMART Carb_anhydrase_2a 35 262 IPR001148 -
Tpr6g1464 270 Gene3D Alpha carbonic anhydrase 30 269 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1464 Tpr-Chr6 15780043 15783343 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1464 K01674 - gmx:100781864 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1464 6 15780043 15783343 Tpr6g1464 6 15780043 15783343 ECH