Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1460 ATGTCGCCGGCGGCGATGAACTTTTCCTCCTCCGATACAACTCCACATTCTCCTCTCCATTTCGCCCCTTTCAACGCCGACGCCACCATCCCTGTCGGTTCCACCGCACGTGGAAAGTCGAGACCGAGACTGACAAAATTGAGAAAACAATCGGCGACTCAGAACGCAAGGTCTAGGACCAGAACCGCCGATGCAGTTGACGATGAAGTCTCTGGCTCTGGCTCCGGTTTCGGTTTCAATCCTTTTCGCTCCGATCAGGTAAGTGATAATTTTAAAGGAGTAGAAACTGATGCCGGTTCTTTTGTGTTTAGTGCTAGAAAGATTGATTCTGATTCTGTTAGGGATTTGAATTCGGAACAGAAAGAATCAGAGGTTAGGAAAAGTGGCGGTGTTGAATTTGTGTTTAGTGCTAAAGAAATCGATTCTAAATCGAATTCAATTCTTGATGGAGAGAAAAAGAATAGTGAGAGAAATACATCGAATTCAGAAGGGGAGAAGGGGAAAGTTAATTTTACAGGGTTTGTTTTTGGTGCTGGTAGAAATGATTTGCATTCTAATTTTAATATAGAAAAAGGAAAATCTAGTGTACCTGATGGTAAGGAGAGGGAATGTAAAACTGAATTTGTGTTTGGTGATAAACAACATATAGATATTAAAATGTCAAGTTTTAATGTAGAAAAGAAGGAATCTGTTGACAGCATGAGAAATTCGAATAATGGAAGTGGCGTTTTTCATGCTGCCACGGAAACGAACAGTAGTTTTGATAAAGATGCTGATAAGTGTGGTAATCTGGGTAATGATGTTAAGTCAAAGAGTGGAAAGGGAAGTACTAATGGTTTTACTGCTACTTTTAATGACATTTCTGGTAGTAAATTAGTAGATGAGATAAAGAAACTGAACATCAATCATCCTGAGGGTGTCCGTATTGCTAGAGATTCTACGAAGTCAGGTGTAAGTAGTAGCAATGGTTTTGTGTTTGGAGGAAGTGACAAGGTTTCTAGTGTTAGTTCGGGAACTAATACTAGCGGTGAACAATTGTATACTAATGTTGATTTTGAGAATATTGGACGGCAATATGCCAAAGCTGGCAGAAAAGATGATGTTAAAAATGGAACTGCTTGTGGCATTGCCCAGGATGCTACAGGAATACCTTGTTCTAAGACATCAACCAGTCAGGGTAGGATCGGAGATTTCCAGTGTGGCAAAATTCCAGAATTTCACGTGTCTGAAGATGCTCAAGTGAATGGAGCTGAAGAGTCTTGTACGGACTTTAAACCTCCGGCATGGGATCCTTCTTGTTTTAAAGATAACTTATTTTGTAACCTAAATAAAAAATTTGAATCCACACATAAGACTAAACCTTCCAAAGATAAAGGATCAAATTTCCTGAGGCGGAAATCGAAGTCACATTCATTGAATAAGAAACAGACAAGGATAGATCATTTGCCAAAGGAAAACAGTTCACTTGAAACCCCTGAATCTTCTGGCGGCTTCTCTCCGATGGATTTTTCTCCGTATCAAGAAACAGCAGCAGATGATCAAGATCTAAAGGCTTCAGAAGAATTAAATGTGCTGCACCCATCATTATCAATTCCCACTGATTATAAAGATGACCTCACCTCGAACTCTGAAAAGAAAAAAGCTGATATATTTCATTTTGTTAATGGTCTGGGTGATTCGAAGGAGAAAGATTTTGCATTTTCTGCAGGATCCACTGTAGAGGGTACTTCATCATTATATAAGCGTAAACAGAAGAAATTTAGGAGGAAAATGGGGTGCGGAAAGCCTGTATCTTCCGCACAATTTTCTCCAATTACCACTCCCAACGTGTCATCGCTCTCTGATGTTACGGACAAGTCTCAGATGAATGATCAGCTCACGGAAGGGGGTGATACGTCACTGGCTACAATTGAAGCTGCCTGTTACCAATGGAGACTCAGGGGGAACCGTGCTCATAAAGCTAAGGATCTTTCTAAAGCTGAGGAATTCTACACAAAAGGAATAGATTCTGTCCCTTCCAGTGAAAGATCAGGATGCTGCAGTAAGCCTCTTTTACTGTGTTATAGCAACCGTGCAGCAACACGTATTAGTCTTGGAAGGATTAGGGAAGCTCTAGAGGATTGCATGAGGGCTACTTCTTTGGACCCCACCTTTCTGAAAGTACAGATGAGAACAGCTAATTGTCACCTTTTGCTAGGGGAATTTGAAAATGCCCAGCAATGTTATAACAAGTGCCTGGAATCAGGTAAAGTTGTTTGTTTGGATCGGAGAGTAATAGTAGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTAGTTAAGTGTATGAATGATGCTGCTGAACTTTTGAAGCAGAGGACTTCTGATGCAGCTGGTTCTGCTTTAGAACTTCTTACAAAGGCATTGTCAAAGAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCCGAGGCTCTGTATTTGCTTCAAAAGTATGATGCTGCAATTCAGCTGTGTGAACAGAGTCTGAAGCTTGCAGAAAAGAATTTTGCCTCGCCAAACAGTGCAAACAATTCCAATAATTCCACGCATGATAGTTACTCTAGTGTCAAATTGTGGAGATGGTCATTGATATCAAAGTGTTACTTTCGTTTGGGGAGGCTGGATGCATCACTTAATATTATTGAAAAATTACGGCAAACAGCATCTGTCAATGACAAGTGTGTGATTGATAATAATGAAGACTTGCTGTCATTAGCTGCTACTATACACGAACTTCTAGACCACAGGAAAGCAGGAAATGAGAACTTTAAATTGCAAAAGTATGCAGCAGCAGTGGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGCCCTTTTGCAGCAATATGTTTTGGCAACCGTGCTGCTGCTCATCAAGCTTCGGGCCAAATTGCTGATGCCATTGCTGACTGCAGCATGGCTATGGCCCTTGATGGAAATTATGCAAAGGCAATATCTAGAAGAGCCACCTTGCACGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACCTCAGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACACTCTGACTCACCAAATGGATCAACCGGTGGGAAAGAATCAAGGCAAGCTCAACAACGTCTGCTTACTGTGGAAGATCAAGCCAAAATGGGGACCCCCTTGGACTTTTATCTCATTTTAGGAATTAAACCAGCTGACACAGCAGCGGATATCAAGAAGGCCTATCACAAGGCAGCTCTCAGACATCATCCAGATAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGCCATGTATGGAAGGAAATTTCTCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACACTGCCAAGCGCTCGGAGTATGATATGGAAGAGAACATAAGGAAAACTTATAAACAAAGTAATGGAGGTAGCGCAGGCAGGAGATCTTCAGACGTTTATGGGAATGGAAGATCATCTGATGGTTATAGATCTGCCTATGACAGAACTTCTAACAGACGATATGGATATCATTGGAGGACATATGGAGATTCATATTCTCGATGGTAA 3627 0.4127 MSPAAMNFSSSDTTPHSPLHFAPFNADATIPVGSTARGKSRPRLTKLRKQSATQNARSRTRTADAVDDEVSGSGSGFGFNPFRSDQVSDNFKGVETDAGSFVFSARKIDSDSVRDLNSEQKESEVRKSGGVEFVFSAKEIDSKSNSILDGEKKNSERNTSNSEGEKGKVNFTGFVFGAGRNDLHSNFNIEKGKSSVPDGKERECKTEFVFGDKQHIDIKMSSFNVEKKESVDSMRNSNNGSGVFHAATETNSSFDKDADKCGNLGNDVKSKSGKGSTNGFTATFNDISGSKLVDEIKKLNINHPEGVRIARDSTKSGVSSSNGFVFGGSDKVSSVSSGTNTSGEQLYTNVDFENIGRQYAKAGRKDDVKNGTACGIAQDATGIPCSKTSTSQGRIGDFQCGKIPEFHVSEDAQVNGAEESCTDFKPPAWDPSCFKDNLFCNLNKKFESTHKTKPSKDKGSNFLRRKSKSHSLNKKQTRIDHLPKENSSLETPESSGGFSPMDFSPYQETAADDQDLKASEELNVLHPSLSIPTDYKDDLTSNSEKKKADIFHFVNGLGDSKEKDFAFSAGSTVEGTSSLYKRKQKKFRRKMGCGKPVSSAQFSPITTPNVSSLSDVTDKSQMNDQLTEGGDTSLATIEAACYQWRLRGNRAHKAKDLSKAEEFYTKGIDSVPSSERSGCCSKPLLLCYSNRAATRISLGRIREALEDCMRATSLDPTFLKVQMRTANCHLLLGEFENAQQCYNKCLESGKVVCLDRRVIVEAAEGLQKAQEVVKCMNDAAELLKQRTSDAAGSALELLTKALSKSLYSERLLQMKAEALYLLQKYDAAIQLCEQSLKLAEKNFASPNSANNSNNSTHDSYSSVKLWRWSLISKCYFRLGRLDASLNIIEKLRQTASVNDKCVIDNNEDLLSLAATIHELLDHRKAGNENFKLQKYAAAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDGNYAKAISRRATLHEMVRDYEQAACDLRRLISVLGSQSNEKAKHSDSPNGSTGGKESRQAQQRLLTVEDQAKMGTPLDFYLILGIKPADTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGHVWKEISQEVHKDADRLFKMIGEAYAVLSDTAKRSEYDMEENIRKTYKQSNGGSAGRRSSDVYGNGRSSDGYRSAYDRTSNRRYGYHWRTYGDSYSRW* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1460 1208 Pfam DnaJ domain 1065 1148 IPR001623 -
Tpr6g1460 1208 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 411 1208 - -
Tpr6g1460 1208 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 11 416 - -
Tpr6g1460 1208 CDD DnaJ 1065 1140 IPR001623 -
Tpr6g1460 1208 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 11 416 - -
Tpr6g1460 1208 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 411 1208 - -
Tpr6g1460 1208 SMART dnaj_3 1064 1143 IPR001623 -
Tpr6g1460 1208 ProSitePatterns Nt-dnaJ domain signature. 1128 1147 IPR018253 -
Tpr6g1460 1208 SUPERFAMILY Chaperone J-domain 1052 1147 IPR036869 -
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 450 464 - -
Tpr6g1460 1208 Gene3D Tetratricopeptide repeat domain 762 909 IPR011990 GO:0005515
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 450 499 - -
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 1155 1176 - -
Tpr6g1460 1208 SMART tpr_5 685 718 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 919 952 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 641 674 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 719 752 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 991 1024 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 865 898 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 809 842 IPR019734 GO:0005515
Tpr6g1460 1208 SMART tpr_5 957 990 IPR019734 GO:0005515
Tpr6g1460 1208 Gene3D DnaJ domain 1052 1167 IPR036869 -
Tpr6g1460 1208 Pfam Tetratricopeptide repeat 726 747 IPR019734 GO:0005515
Tpr6g1460 1208 Pfam Tetratricopeptide repeat 810 842 IPR019734 GO:0005515
Tpr6g1460 1208 Gene3D Tetratricopeptide repeat domain 640 757 IPR011990 GO:0005515
Tpr6g1460 1208 Gene3D Tetratricopeptide repeat domain 918 1036 IPR011990 GO:0005515
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 1156 1176 - -
Tpr6g1460 1208 PRINTS DnaJ domain signature 1067 1085 IPR001623 -
Tpr6g1460 1208 PRINTS DnaJ domain signature 1085 1100 IPR001623 -
Tpr6g1460 1208 PRINTS DnaJ domain signature 1123 1143 IPR001623 -
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 473 487 - -
Tpr6g1460 1208 SUPERFAMILY TPR-like 922 1020 IPR011990 GO:0005515
Tpr6g1460 1208 ProSiteProfiles dnaJ domain profile. 1065 1151 IPR001623 -
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 1024 1048 - -
Tpr6g1460 1208 Coils Coil 822 842 - -
Tpr6g1460 1208 SUPERFAMILY TPR-like 643 841 IPR011990 GO:0005515
Tpr6g1460 1208 Coils Coil 766 786 - -
Tpr6g1460 1208 MobiDBLite consensus disorder prediction 26 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1460 Tpr-Chr6 15745902 15756051 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1460 K09527 - gmx:100809278 1389.79