Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1458 ATGGTTTTAAAACTTATTGGTTTCTCAAAACATGTCATATCTTTATTTATTAAAATCATTATACTACTAATCTTTAGCTTTATTCTAAACAGAGCTGACTCAGGCTGTAACAATTCTGATACAACTTCTTTAGTTCCAATTCCACCCTATGAAATCCTCTTATCACTGCAATCACAATCCCTTGATGGCCACTTGAGCTTAAAGGACAATGAAGGTGCTGCCAAGGACTTTGGCAACATACACCATTTTCCTCCTCTAGCAGTGTTGCATCCGAAAACTGTTTCGGATATTTCACGAACCGTGAAGTATATTTTTGAAAAAGGGACTGATTCAGAGGTGAAGATTGCTGCTAGAGGTCATGGACATTCACTTCAAGGTCAGGCACAAGCACATCAAGGACTAGTCATTAGCATGGAGTCGCTTCGCAGTCCTGAAATGAAGATTCAAACCGGTGAATTTCCTTTTGTCGATGTCTCAGCTGGTGAGTTGTGGATAAACATTCTGCATGAGACACTTCAATATGGATTGGCACCAAAATCTTGGACAGATTATCTTCACCTCACTGTTGGAGGCACTCTTTCAAATGCTGGAGTAAGTGGACAAGCTTTTAGGCATGGACCTCAGATCAATAACATCTTCCAGTTGGAAGTTGTCACAGGAAAAGGAGAGGTGATTACCTGTTCAGAAAACCGAAATGCTGACCTTTTTCACGGTGTTCTTGGAGGGCTTGGTCAATTTGGCATCATCACCAGAGCTAGAATTTCTCTTGAACCAGCACCAAAGATGGTGAAATGGATTAGAGTGCTGTATTCAGATTTCTCTGCATTTACAAGGGATCAAGAAAATTTGATATCACTTAAGGACAACACATTTGATTATGTTGAAGGATTTGTAATCATAAATAGAACCGGCATCCTTAATGGTTGGAGATTATCTTTTGACCCCAAAGATCCACTTCAAGCCAGCCAATTCCATTCAGATGGGAAGACTTTCTACTGTCTTGAGATGGCAAAATACTTCAACCCCGATGAAGCTGAAGTCATGAATCAGGGTGTGGATCACCTACTGTCACAGTTGAGTTATATTCCAGCCACACTGTTCCTATCAGAAGTTTCTTACGTGGAATTTTTAGATAGAGTGCATGTTTCTGAGATGAAGCTAAGAGCACAAGGCTTAGGGGATGTTCACCATCCTTGGCTGAACCTTCTGATCCCAAGAAGTGAGATTCATAACTTTGCTGAAGAAGTATTTGGCAATATTCTTAAGGACACAAGTAATGGTCCCGTACTCATTTACCCTGTCAATCAAACAAGGTGGAACAGTAAAACATCTTTTGTCACACCAGAGGAAGATGTTTTCTACCTAGTGGCATTCCTAACATCAGCAATCCCATTTTCAACTGGTGAAAACAGTTTAGAATACATTCTAAACCAAAACAAAAGGATCCTAGATTTCTGCACCAATGCCCAACTACATGTGAAGCAATATCTTGCTCATTACAGCACACAGGAAGAATGGCAAACTCACTTTGGGTCAAAATGGGGGGCATTTGAGGAAAGAAAAAGAGCCTATGACCCACTAGCACTACTTGCCCCTGGCCATAGAATCTTTCAAAAGGCAATGTCCACCTCTATTTAG 1638 0.4054 MVLKLIGFSKHVISLFIKIIILLIFSFILNRADSGCNNSDTTSLVPIPPYEILLSLQSQSLDGHLSLKDNEGAAKDFGNIHHFPPLAVLHPKTVSDISRTVKYIFEKGTDSEVKIAARGHGHSLQGQAQAHQGLVISMESLRSPEMKIQTGEFPFVDVSAGELWINILHETLQYGLAPKSWTDYLHLTVGGTLSNAGVSGQAFRHGPQINNIFQLEVVTGKGEVITCSENRNADLFHGVLGGLGQFGIITRARISLEPAPKMVKWIRVLYSDFSAFTRDQENLISLKDNTFDYVEGFVIINRTGILNGWRLSFDPKDPLQASQFHSDGKTFYCLEMAKYFNPDEAEVMNQGVDHLLSQLSYIPATLFLSEVSYVEFLDRVHVSEMKLRAQGLGDVHHPWLNLLIPRSEIHNFAEEVFGNILKDTSNGPVLIYPVNQTRWNSKTSFVTPEEDVFYLVAFLTSAIPFSTGENSLEYILNQNKRILDFCTNAQLHVKQYLAHYSTQEEWQTHFGSKWGAFEERKRAYDPLALLAPGHRIFQKAMSTSI* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1458 545 Gene3D - 262 496 IPR016170 -
Tpr6g1458 545 ProSiteProfiles PCMH-type FAD-binding domain profile. 81 259 IPR016166 GO:0071949
Tpr6g1458 545 PANTHER CYTOKININ OXIDASE/DEHYDROGENASE-LIKE PROTEIN 17 542 - -
Tpr6g1458 545 Gene3D - 138 261 IPR016169 -
Tpr6g1458 545 SUPERFAMILY FAD-binding/transporter-associated domain-like 72 258 IPR036318 GO:0050660
Tpr6g1458 545 Pfam FAD binding domain 85 228 IPR006094 GO:0050660
Tpr6g1458 545 Gene3D - 70 537 IPR016167 -
Tpr6g1458 545 PANTHER GULONOLACTONE OXIDASE 17 542 - -
Tpr6g1458 545 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 260 537 IPR015345 GO:0009690|GO:0019139|GO:0050660
Tpr6g1458 545 ProSitePatterns Oxygen oxidoreductases covalent FAD-binding site. 85 120 IPR006093 GO:0016491
Tpr6g1458 545 SUPERFAMILY FAD-linked oxidases, C-terminal domain 260 537 IPR016164 GO:0003824|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1458 Tpr-Chr6 15726781 15729806 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1458 K00279 - gmx:100777568 868.996