Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1456 ATGCCATTTTCGACTCGTCTCCATCTCTTTGCAAGGCCTTTACTCTCTTCCTCTCTCCTTTACTCTTCCCGCCAGACTGGAATTAGAGAAATAATGAGCAGGATTGGCATGAACACCTGCTCGCTTTCTACTACAGCCGAAGCTTCAGATTTAGAATCTGATGAGATACATGATGATGTCAAAGCAGCACAGAAAAGTAGTGCACTTTCCTTGGCTGTCTCACAGCTTGCTACCGAGTTTAGCAAGGAGTCAATGTTATCTTTGAACAAGTTTTTTGGTGTACGCTATGCCAATGTCGTATCTACAGGCTCCTTGAAGCTTGACATAGCTCTTGGAACTGGAGGATTACCAAAGGGTAGGATTGTTGAAATATACGGACGAGAAGCAGCTGGTAAGACAACACTTGCCCTTCAAATTATTAAAGAAGCTCAAAAGCTTGGAGGATATTGTGCATATCTTGATGTAGAAAGTGCATTAGACCTTTCACTTGTGGAGTCAATGGGTGTAAATACCAAAAACCTTCTCATCTCAAATCCTGATTGTGCTGAAAATTTGTTGAGCATGGTTGATACACTAACAAAAAGTGGAGCTGTAGACGTGATTGTGGTTGATAGTGTTGCTGCTCTTGTCCCCAAATGCGAACTTGATCAATTGGGAGTTGTTACGAATCAAGATTTACATTCGCGAATGATGACTCAAGCACTACGGAAAATTAATTATTCATTGTCCCGCTCCCAAGCTCTCTTAGTTTTTGTTAATCAGGTTAGATTTAGTCCTAAAGCATTTGGGGGACGTGGACCTATGGAAGAGGTCACTTGTGGTGGAAACGCTTTGAGATTCTATGCAGCTGTTCGTTTGCGACTTTCAAGAATGGGATTGATCAAAACTGAAGATAAGGTTGAGGGTATTACGGTTTGTGCGCAAGTGGTAAAAAATAAACTAGCACCAGCATCAATGAAAAAGGCTGAACTTGGTATAAAGTTTGGAAAAGGCTTTTGCCAAGAATCAGAGGTCTTTGATTTAGGTTGTGAACATGGACTCATTATGAAAGATGAGGGAAACTACTTTATTGAAGGGGATGCTTTTAGTAGTAGAGAAGCTGCTGAACTATTTTTGGCTAAAAATAAAAGTATTTGTGACAAGTTAGTTATGGACATGAAAAGACTTAATCTTTAA 1176 0.4014 MPFSTRLHLFARPLLSSSLLYSSRQTGIREIMSRIGMNTCSLSTTAEASDLESDEIHDDVKAAQKSSALSLAVSQLATEFSKESMLSLNKFFGVRYANVVSTGSLKLDIALGTGGLPKGRIVEIYGREAAGKTTLALQIIKEAQKLGGYCAYLDVESALDLSLVESMGVNTKNLLISNPDCAENLLSMVDTLTKSGAVDVIVVDSVAALVPKCELDQLGVVTNQDLHSRMMTQALRKINYSLSRSQALLVFVNQVRFSPKAFGGRGPMEEVTCGGNALRFYAAVRLRLSRMGLIKTEDKVEGITVCAQVVKNKLAPASMKKAELGIKFGKGFCQESEVFDLGCEHGLIMKDEGNYFIEGDAFSSREAAELFLAKNKSICDKLVMDMKRLNL* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1456 391 PANTHER DNA REPAIR PROTEIN RECA HOMOLOG 2, MITOCHONDRIAL 5 388 - -
Tpr6g1456 391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 73 317 IPR027417 -
Tpr6g1456 391 ProSitePatterns recA signature. 277 285 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Tpr6g1456 391 ProSiteProfiles RecA family profile 1. 96 255 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Tpr6g1456 391 PANTHER RECA 5 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 154 183 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 188 217 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 226 255 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 274 302 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 308 337 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 PRINTS RecA protein signature 361 378 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 ProSiteProfiles RecA family profile 2. 262 337 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Tpr6g1456 391 Pfam recA bacterial DNA recombination protein 68 332 IPR013765 GO:0003697|GO:0005524|GO:0006281
Tpr6g1456 391 Gene3D - 95 389 IPR027417 -
Tpr6g1456 391 SMART AAA_5 118 292 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1456 Tpr-Chr6 15695432 15699685 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1456 - - gmx:100777423 566.614