Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1442 ATGGCAATTTTATTCTCTACAATTCTACTTCCTTCCACTAACCTCACTTCAAAACTACCCATTTTCAACAACCCACAACATCACGCATTTCCATCTCTTCGCCATTTCACAGATACTACTAAACGCTTTCATAAAGCTTCGTCTTTTATTGCTTTTGCGCTGAACGGTAACCCCACTCAGAGACCCAGAAGAGATAGTAGAAACCCGGTTTTGAGTGAAGGTAGAGATGAAGATGAAGCTCTTGGACTCATTTGCCCTGGTTGTGGAATTTTCATGCAAGATAAAGATCAAAACCTTCCTGGGTTTTACCAACAAAAAGAGGTCAAAGTTGAAAATTTTACAGATGATGATTATGTGTTTGATGAAGATGAAGAACCAGAAGACGGCGACGAAGATGATGAAGAAGAAGACGATGATGATGATGATGACGACGAGGGTGAAGAAGTTCAGGGGTCAATTAATGAGTTTGATGAGTTAGAAGCTATGTTACTTGGTGAAGAAAATGATGGTGAGCTTGATTTAGATGGGTTTAAACAAGCAGGGGTTGGTTATGGTAATGTTACTGAGGAGGTTTTGGAGAGGGCAAGGAAGAAGAAAGTATCAAAAGCTGAGAAGAAGAGAATGGTTAGAGAAGCTGAGAAGGTGAAAGAAGAGGTTACTGTTTGTGCTAGGTGTCATTCCTTGAGAAATTATGGGCAGGTGAAGAATAACACAGCTGAGAATTTGATCCCTGATTTTGATTTCGATAGGTTGATTTCGACTAGGTTAATGAATCCTGCTGGTAGTGGTAGTTCTACTGTTGTTGTTATGGTTGTTGATTGTGTTGATTTTGATGGTTCTTTCCCGAGAACGGCTGTGAAATCGTTGTTTAAGGCTTTTGAAGGTATTCAGGAGAATTCGAAGAAGGGTAAGAGATTGCCGAAGCTTGTTCTTGTGGCTACTAAGGTTGATCTCCTGCCGTCTCAGGTTTCTCCTACGAGGTTGGATAGATGGGTTCGACACCGCGCAAGTGCTGGAGGAGCGCCTAAGTTAAGTGCGGTTTATTTGGTCAGTTCTCGAAAGGATTTGGGAGTGAGGAATGTGTTGTCGTTTGTAAAGACTTTGGCCGGTCCTCGTGGGAATGTGTGGGTGATTGGGGCTCAAAACGCTGGGAAGTCGACTCTAATCAATGCTTTTGCGAAGAAAGAAGGAGCCAAAGTTACAAAGCTCACAGAAGCTCCAGTTCCTGGGACGACGCTTGGGATATTGAGAATTGGAGGAATTTTGTCGGCTAAAGCTAAGATGTTTGATACTCCAGGGCTCTTGCATCCGTATTTATTGTCGATGAGATTGAACCGGGAGGAACAAAAGATGATTGAGATACGGAAGGAACTTCGACCTCAGACATATAGAATTAAGGCAGGACAAGCTATACATGTTGGCGGCTTGGCGAGACTTGACCTCATTGAATCCTCTGTTGAAACAATATATGTCACAGTTTGGGCATCGGCAAATGTTTCTCTACACATGGGAAAAATCGAAAACGCTAATGAGATTTGGAATAATCATGTTGGTGTCAGGCTTCAGCCTCCGATCGGTAATGACCGCGGAGCAGAACTAGGTACATGGAAAGAAAGGGAAGTAAAAGTATCTGGAACAAGTTGGGATGTCAACTGCATGGACATATCAATAGCTGGTTTCGGTTGGTTCTCTTTGGGTCTTCTAGGTGAAGCAACCATGAAATTATCGACCTATGATGGAGTTGAAATAACTTTGAGAGAACCATTGGTACTTGACCGGGCCCCATCTCCTGAGAAAGCTGGTTTTTGGTTACCAAAAGCTATATCTGAAGCTATTGGTAACCAAACTAAACTTGAAGCTCAAAGAAGGAAAAAACTTGAAGACGAAGATACAGAATTGGTAGGGGCAGGGTCAGAGATATCTGCATGA 1929 0.4251 MAILFSTILLPSTNLTSKLPIFNNPQHHAFPSLRHFTDTTKRFHKASSFIAFALNGNPTQRPRRDSRNPVLSEGRDEDEALGLICPGCGIFMQDKDQNLPGFYQQKEVKVENFTDDDYVFDEDEEPEDGDEDDEEEDDDDDDDDEGEEVQGSINEFDELEAMLLGEENDGELDLDGFKQAGVGYGNVTEEVLERARKKKVSKAEKKRMVREAEKVKEEVTVCARCHSLRNYGQVKNNTAENLIPDFDFDRLISTRLMNPAGSGSSTVVVMVVDCVDFDGSFPRTAVKSLFKAFEGIQENSKKGKRLPKLVLVATKVDLLPSQVSPTRLDRWVRHRASAGGAPKLSAVYLVSSRKDLGVRNVLSFVKTLAGPRGNVWVIGAQNAGKSTLINAFAKKEGAKVTKLTEAPVPGTTLGILRIGGILSAKAKMFDTPGLLHPYLLSMRLNREEQKMIEIRKELRPQTYRIKAGQAIHVGGLARLDLIESSVETIYVTVWASANVSLHMGKIENANEIWNNHVGVRLQPPIGNDRGAELGTWKEREVKVSGTSWDVNCMDISIAGFGWFSLGLLGEATMKLSTYDGVEITLREPLVLDRAPSPEKAGFWLPKAISEAIGNQTKLEAQRRKKLEDEDTELVGAGSEISA* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1442 642 MobiDBLite consensus disorder prediction 116 154 - -
Tpr6g1442 642 Coils Coil 198 218 - -
Tpr6g1442 642 MobiDBLite consensus disorder prediction 113 154 - -
Tpr6g1442 642 MobiDBLite consensus disorder prediction 55 75 - -
Tpr6g1442 642 PANTHER GTP-BINDING PROTEIN BRASSINAZOLE INSENSITIVE PALE GREEN 2, CHLOROPLASTIC 53 632 - -
Tpr6g1442 642 PANTHER GENETIC INTERACTOR OF PROHIBITINS 3, MITOCHONDRIAL 53 632 - -
Tpr6g1442 642 CDD YqeH 222 434 - -
Tpr6g1442 642 MobiDBLite consensus disorder prediction 619 642 - -
Tpr6g1442 642 Pfam 50S ribosome-binding GTPase 375 450 IPR006073 GO:0005525
Tpr6g1442 642 Gene3D - 261 437 IPR027417 -
Tpr6g1442 642 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 265 490 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1442 Tpr-Chr6 15562082 15567093 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1442 - - gmx:100805561 907.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1442 6 15562082 15567093 Tpr6g1442 6 15562082 15567093 ECH