Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1421 ATGAGGTCACAAATGCACCTCACTGTTGCCGCAATGGCAGTTGTCGTGACTGCATGGTTAGCCTATAACCGTGACGTGACAGATACATCAACCTTTGGAGTTTCCGATGTTTGGCAATACGAAATGGTTCCGATTGAAAATGGTGCCATTGGACCAGAGAGTTTCGCTTTCGATCCTCACGGTGAAGGACCTTACACCGGCGTTTCTGACGGTCGAATTATCAAATGGAACTGCCGTGAGAGTCGTTGGGTCGACTTTGCCGTCACTTCTTCACACAGAGGTGATGGTGATGATGAAGAATGTGGAGGTCCATATAAGGATCATCCCAAGAAAGAGCACATATGTGGGCGCCCACTTGGGCTTTGCTTTAACATAGCATCGGGCCAACTTTATGTTGCTGATGCATATATGGGCCTAGTTGTTATTGAGCCCAATGGTGGCACTGCGAGAAAAATCACATCACATGCAATTGAAGGTGAACCTTTGGCATTTACAAACAGTTTGGACATTGATCAAAGAACTGGAGCAGTCTACTTTACCAGCAGCAGTTCTAAATACCAGAGAAGGAATTATGTGTCTCTAATCCTAAGTGGAGACAAATCAGGGAAGCTAATAAAATATGAACCAAAAAGTGAACAAGTCACTATTCTTCTAAACAATCTCACATTTGCAAATGGAGTAGCACTTAGCAAAGATGGCAACTACATTCTAATAGCAGAGACAACAAATTGTAGAATACTAAGGTATTGGTTACAAACATTAAAAGCTGGAACATTAGAAGTTTTTGCCAATCTACCAGGTTTTGTGGACAACATAAAACAAAGTCCAAGAGGTGGATTTTGGGTTGGAATATACTCAAAAAGAGAAAAATTTATACAATGGATTTTATCATATCCTTGGATAGGAAAAGGGTTGGTAATTCTTCCTTTGGATATAACAAAAATTTATTCATATTTGGCTAAATTGAAAGGGAGTAGTGGATTGGCAATTAGGTTAAGTGAAGAGGGTGATGTGTTGGAAATTGTTGAAGATCATAGAAGTGGAATTAGAAGGTCTATTAGTGATATTGAGGAAAAAGATGGGGTATTATGGGTAGGATCAGTTGATGCACCTTTTGCTCTTATGTATAATACTCTTGTGGCACAAGAGTGA 1152 0.401 MRSQMHLTVAAMAVVVTAWLAYNRDVTDTSTFGVSDVWQYEMVPIENGAIGPESFAFDPHGEGPYTGVSDGRIIKWNCRESRWVDFAVTSSHRGDGDDEECGGPYKDHPKKEHICGRPLGLCFNIASGQLYVADAYMGLVVIEPNGGTARKITSHAIEGEPLAFTNSLDIDQRTGAVYFTSSSSKYQRRNYVSLILSGDKSGKLIKYEPKSEQVTILLNNLTFANGVALSKDGNYILIAETTNCRILRYWLQTLKAGTLEVFANLPGFVDNIKQSPRGGFWVGIYSKREKFIQWILSYPWIGKGLVILPLDITKIYSYLAKLKGSSGLAIRLSEEGDVLEIVEDHRSGIRRSISDIEEKDGVLWVGSVDAPFALMYNTLVAQE* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1421 383 Pfam Strictosidine synthase-like, N-terminal 41 76 - -
Tpr6g1421 383 Pfam Strictosidine synthase 166 252 IPR018119 GO:0009058|GO:0016844
Tpr6g1421 383 PANTHER STRICTOSIDINE SYNTHASE-RELATED 8 373 - -
Tpr6g1421 383 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 8 373 - -
Tpr6g1421 383 SUPERFAMILY Calcium-dependent phosphotriesterase 21 371 - -
Tpr6g1421 383 Gene3D - 35 381 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1421 Tpr-Chr6 15324876 15329204 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1421 - - mtr:MTR_7g090320 629.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1421 6 15324876 15329204 Tpr6g1421 6 15324876 15329204 ECH