Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1420 ATGAACTCAAAACTAATTGTTGTTGCAACTTTTCTCGCACTCTTCGCCATAATCTATTCTTTATTCGACCCAAAATACCTCTTTACACCTGTTCACATTCCTGGATCCAAGGACCATCTTCATACTTCTCGTTTAATTAACGTCACCGGTGCTGTTGGGCCGGAAAGTCTTGTTTTCGATAGTCACGGTGAAGGTCCGTACACCGGTGTTGCTGATGGTCGGATTCTGAAGTGGGAAGGAGAAGAACGTGGTTGGATTCAATTTGCTGTCACAAGTTCCGATAGGTCGGAATGTGTTCGTCCATTTGCACCAGAGTTGGAGCATATATGTGGGAGGCCACTAGGTCTAAAGTTTGATAAGAAAAATGGAGATTTGTACATTGCTGATGCCTACCTTGGCCTCAAAGTAGTAGGACCTGAAGGTGGTTTGGCCACCCAGGTAGTAACAGAAGCTGAAGGACAGCCCTTTTACTTCACCAATGACATGGACATCAGTGAAGACGAAGATGTGATTTACTTCACTGATTCAAGCACAGTCTACCATAGAAGGCAATTTATGCTTGTACTTCTTAGTGGAGACAAGACAGGGCGGTTAATGAAATACGATAAGTTGACAAAAGAAGTGAAGGTCTTATTAAGTGGTCTTGCTTTTCCCAATGGTGTTGCGTTAAGCAAAGATGGTTCATTTCTTCTAGTAGCTGAAACCTCGACTCGCAAGATTTTGAGGCTTTGGCTTCATGGACCTCATGCTGGCCAAGTTGATACTTTTGCCGTTCTTCCAGGTTATCCAGACAATGTAAGGAGAAATTCAGAAGGAGAGTTCTGGGTTGCTTTGCATGCCAAATACACTCCTTTTGCAAAGTGGACTGCTGCAAATCAATGGGCTGCTAAAGTTTTGTTAAAGTTTGGCAACTTCAAGCAGTTGCAAAAGTCGTTGGCGCAGAAGCCTCATGCTGCAGCTATAAAGCTGAGTGATGAAGGGAAAATATTGGAAGTCTTGGAAGATTGTGAAGGGAGGACCTTGAAGTTCATTAGTGAAGTGGAAGAGAAAGATGGAAAACTTTGGATGGCATCAGTGTTAATGCCTTATATTGGTGTTTATAGTTTATAA 1110 0.427 MNSKLIVVATFLALFAIIYSLFDPKYLFTPVHIPGSKDHLHTSRLINVTGAVGPESLVFDSHGEGPYTGVADGRILKWEGEERGWIQFAVTSSDRSECVRPFAPELEHICGRPLGLKFDKKNGDLYIADAYLGLKVVGPEGGLATQVVTEAEGQPFYFTNDMDISEDEDVIYFTDSSTVYHRRQFMLVLLSGDKTGRLMKYDKLTKEVKVLLSGLAFPNGVALSKDGSFLLVAETSTRKILRLWLHGPHAGQVDTFAVLPGYPDNVRRNSEGEFWVALHAKYTPFAKWTAANQWAAKVLLKFGNFKQLQKSLAQKPHAAAIKLSDEGKILEVLEDCEGRTLKFISEVEEKDGKLWMASVLMPYIGVYSL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1420 369 Pfam Strictosidine synthase-like, N-terminal 38 78 - -
Tpr6g1420 369 PANTHER STRICTOSIDINE SYNTHASE-RELATED 3 367 - -
Tpr6g1420 369 SUPERFAMILY Calcium-dependent phosphotriesterase 34 367 - -
Tpr6g1420 369 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 10 3 367 - -
Tpr6g1420 369 Pfam Strictosidine synthase 160 247 IPR018119 GO:0009058|GO:0016844
Tpr6g1420 369 Gene3D - 37 369 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1420 Tpr-Chr6 15318001 15321643 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1420 - - lang:109348186 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1420 6 15318001 15321643 Tpr6g1420 6 15318001 15321643 ECH