Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1416 ATGGCAAGGAAATCCGTGAGACAAGTTTCTTATCAAGATGTTGAGTGGGTGCAGAATCTCGTAGAACGATGCATACAACTGTATATGACCCCAAAAGAAGTAGTGACCACACTACAAAATCAAGCAAATATAGAACCTGAATTCACCAAATCAGTTTTGCAAAGGCTTGAAGAACAAAATCCCGAGTTCTTCAAAGCTTATTATACAAGATTGGCATTGAAGCAGCAAATAGAAGAATTCAACAAATTGCTGGAAAAACAAAAGCAATTAATGGACTTAGAACAACAAACTAAAGTTGCATCACTACCTACCTCTAATGGATTTCAATATCATGTTGCTTCATCACTACCTACCTCTAGTGAATTTCACATGTTCGCGGCTAACGAAAACATCAACGAGGCTGTCCCAAATTTCTGCGTTGCTTCTGCTACGCCAATCACCGGCACAAATTTAGAATCTAACTCACATTTGGCAAATGAAGCAGCTCTTGATCTTCCAAACACTTCTAATGGATCATTTCCAAGAAACTTTAGCCTTCCAAATATTTCTGATCTTGATTATCTGTTTGATGTACAAGACAACTATCCTGAGGCACAACCCTTCCTAGATTGTACCATTGATGATTTTGATATTGGTAGCTTTCCCTAA 648 0.3796 MARKSVRQVSYQDVEWVQNLVERCIQLYMTPKEVVTTLQNQANIEPEFTKSVLQRLEEQNPEFFKAYYTRLALKQQIEEFNKLLEKQKQLMDLEQQTKVASLPTSNGFQYHVASSLPTSSEFHMFAANENINEAVPNFCVASATPITGTNLESNSHLANEAALDLPNTSNGSFPRNFSLPNISDLDYLFDVQDNYPEAQPFLDCTIDDFDIGSFP* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1416 215 Pfam Plant protein 1589 of unknown function (A_thal_3526) 17 69 IPR006476 -
Tpr6g1416 215 Coils Coil 70 97 - -
Tpr6g1416 215 PANTHER OS02G0137100 PROTEIN 1 119 IPR006476 -
Tpr6g1416 215 TIGRFAM A_thal_3526: uncharacterized plant-specific domain TIGR01589 15 70 IPR006476 -
Tpr6g1416 215 PANTHER HISTIDINE-TRNA LIGASE 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1416 Tpr-Chr6 15283111 15286298 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1416 - - cam:101510887 155.992