Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1407 ATGGACAAGTTCGGAAGCTTATTTGAAACCATCGGAAACTTCTTCACCGGCGGCGATCAGATTCCTTGGTGCGACGGTGATGTCATCGCTGGCTGTGAAAGAGAAGTTGCAGAGGCGTCTAATGGTGACTCCGATGAGCGCAAGAATGAAAGCATAATGAGGTTGTCATGGGCACTTGTTCATTCAAGGAAAAATGAAGATGTTCAGCGTGGGATCGCCATGCTTGAAATTTCTTTGGGCAATGATAAAAGTCCTTTACATCAAAGAGAGAAGCTTTATCTTCTTGCTGTTGGGTACTACAGGACTAATGAATATACTAGGAGTCGACAGCTTTTGGAGCAATGTTTGGAGATTGCACCTGATTGGAGGCAAGCATTGTCCCTCAAGAAAATAGTCGAAGATGGAATTGCAAAGGATGGTGTAATAGGAATTGGCATCTCTGCAACTGCTGCGGGGATTTTAGTTGGTATCGTTGCTGCAGCATTGTCCCGAAGGTGA 498 0.4498 MDKFGSLFETIGNFFTGGDQIPWCDGDVIAGCEREVAEASNGDSDERKNESIMRLSWALVHSRKNEDVQRGIAMLEISLGNDKSPLHQREKLYLLAVGYYRTNEYTRSRQLLEQCLEIAPDWRQALSLKKIVEDGIAKDGVIGIGISATAAGILVGIVAAALSRR* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1407 165 PANTHER MITOCHONDRIAL FISSION 1 PROTEIN 3 165 - -
Tpr6g1407 165 Gene3D Tetratricopeptide repeat domain 23 164 IPR011990 GO:0005515
Tpr6g1407 165 CDD Fis1 22 140 IPR033745 -
Tpr6g1407 165 SUPERFAMILY TPR-like 9 163 IPR011990 GO:0005515
Tpr6g1407 165 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 3 165 IPR016543 GO:0000266
Tpr6g1407 165 Pfam Fis1 N-terminal tetratricopeptide repeat 50 77 IPR028058 -
Tpr6g1407 165 PIRSF TPR_repeat_11_Fis1 3 165 IPR016543 GO:0000266
Tpr6g1407 165 Pfam Fis1 C-terminal tetratricopeptide repeat 89 141 IPR028061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1407 Tpr-Chr6 15224659 15229700 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1407 K17969 - gmx:100306722 278.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1407 6 15224659 15229700 Tpr6g1407 6 15224659 15229700 ECH