Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1399 ATGGGTAGTTCATCGGAGGATTTTTCGGTGGTAGTCCTAGCATCCGATCTCGCCGTCGATGCTCGACCTTTCCTTTTCCATCAAGAAGAACAACATCAAGAAGAAGAAAACTGGCACGATTGTTCCCAATACCTATCCCCCGACGAAGACTTCTCCGATCTCGAACAATTACAATTCATTACTCTCCAAGGTTCCGATAAGAACGGTAATCGCATTATCCGTATCGTCGGCAAGTATTATCCCGCAACGGTTGTGAGTGCAGAGCGGCTGAAGAGGTATGTCTTTCACAAGATTTTCAGTGAGTTGCCAGATGGGCCATTTTGCATTGTTTACATGCACACTACTGTTCAAAAGGAGGATAATTCTCCTGGGATGACCATCTTGAGGTGGATTTATGAAGAACTTCCAGATGATTTTAAGGACAGACTTGAAACTATGTACTTCATTCACCCCGGGCTTCGTTCCAGGCTAGTCATAGCTACTCTTGGCAGGTTTTTCTTGAGTGGAGGATTATATTGGAAGATCAAGTACGTAAGCCGCCTTCAGTACCTCTGGGATGATATGAAGAAAGGAGAGATTGAGATACCAGAATTTGTACAAAAGCATGATGATATTTTGGAGAATAGGCCACTCACTGATTATGGAATTGAACCTGACCCCTATCACTTAACTGGGACTGGGATGCCTTCGGTTACATACTCATTTGGAAAATATGAAGAGAGATGGGCAGGGAGGGATCATATCTCTGAGTATGAATATCGCTGA 765 0.4379 MGSSSEDFSVVVLASDLAVDARPFLFHQEEQHQEEENWHDCSQYLSPDEDFSDLEQLQFITLQGSDKNGNRIIRIVGKYYPATVVSAERLKRYVFHKIFSELPDGPFCIVYMHTTVQKEDNSPGMTILRWIYEELPDDFKDRLETMYFIHPGLRSRLVIATLGRFFLSGGLYWKIKYVSRLQYLWDDMKKGEIEIPEFVQKHDDILENRPLTDYGIEPDPYHLTGTGMPSVTYSFGKYEERWAGRDHISEYEYR* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1399 254 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 1 247 - -
Tpr6g1399 254 PANTHER OS01G0948300 PROTEIN 1 247 - -
Tpr6g1399 254 CDD SEC14 48 196 IPR001251 -
Tpr6g1399 254 Gene3D - 48 192 IPR036865 -
Tpr6g1399 254 SMART sec14_4 46 204 IPR001251 -
Tpr6g1399 254 SUPERFAMILY CRAL/TRIO domain 51 190 IPR036865 -
Tpr6g1399 254 Pfam Divergent CRAL/TRIO domain 69 203 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1399 Tpr-Chr6 15074715 15083104 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1399 - - gmx:100527837 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1399 6 15074715 15083104 Tpr6g1399 6 15074715 15083104 ECH