Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g1396 ATGATTGGTAAAGATGGAGGTGTTTTCAAGGCATGGGAAGCCACAGTGAGAAGAACGCACGCAGTAGCTAAGAAGCGCGCTAATAGTATATTTGGAATTGGAACATTATCGATATCAGGCACAGATGATGAAGAAAACAACAGCATTAGCGATAACGAAGATCATGGAAACGAAACATTTGAAATATATAATGAAGAGAAGGTTCTTCCCAATGGAGACTACTATACCGGACAATGGGCGGAGAATTTTCCACATGGGGAAGGAAAATATCTATGGACAGACGGGTGTATGTATGTCGGAGAATGGTTCAAAGGAAAAACAAAGGGAAAAGGAAGATTCAGTTGGCCTTCAGGTGCAACATATGAAGGTCAATTCAAGAGTGGTTTCATGGATGGTGTAGGAACATATACAGGTTGTAATGGAGAGACATATAAGGGAAATTGGGTGCTGAATTTGAAACATGGTCATGGATATAAGAGTTATGTGAATGGTGATTGGTATGAAGGTGATTGGAGGAGAGGGCTGCAAGATGGAAAAGGGAGGTATGAATGGAGAGATATGAGTCATTATATTGGTGAATGGAAGAATGGTGTAATTTGGGGTAAAGGGTCATTTTTTTGGCCTAATGGGAATAGTTTTGAAGGGTTTTGGGAAGATGGTTTACCAAAAGGTGATGGAACATATAGATGGCAAGATGGAAGTTGTTATATTGGGACTTTTAATAAAGATGGTATGAACAAAGATGAAGATGGAACACTTTATCCAATGGATCCATCTGATGAGAGATGGAATTATTGGGATCCTCTAGAATTGTATAATGAATTGAATGGCTATTCAGTTTCTCCTGGTGAGAAAGTTTTGGTTTTGCCATCACAAAAGAAACTTGCTGTATGGAGGTCTACTAAAGGAGGGGAGAGTGTTAGACCTAGGAGAATGTCGGTCGACGGAAGGGTGAGTATTGGAGCGGATAAGCCAACTGATAGAATGAATTTGTGGGATGGTGGTGGGAGTAGTCATGGAGGAGGATGCCATGGTGGTGGAGGAGGTGATGGTGATGCTAGTACTGGTGGTAATAGAACTCCTCCTTTAGGGAGTGAATTTGATGAGGAATCGATTGGTTCACGTATTGATGATGCTAATGATGCTTTGAATCAACTTCAACCTTTGAAAGCACCTAAGAAAGCTAAGAGGCAGGGTGAGACTATATGCAAAGGGCACAAAAATTTTGAGCTTATGCTTAATTTGCAGCTGGGAATTAGGCACTCAGTTGCAAGACCTGCTCCCACAGCATCACTTGATCTTAAGCCATCAGCTTTTGATCCAAAGGAGAAAGTGTGGACAAGATTTCCACCTGAAGGATCTAAATATACTCCACCACATCCATCATGTGACTTTAAATGGAAGGACTATTGCCCGGTAGTTTTTAGGACTCTTAGGAAGCTATTCAATGTGGATCCAGCTGATTACATGCTATCCATATGTGGAAGTGAAGCTCTTCGCGAACTTTCCTCGCCTGGAAAAAGTGGAAGCTTCTTTTACTTGACCAATGACGACCGTTACATGATTAAGACAATGAAGAAAGCTGAAGTAAAAGTCCTCATAAAAATGCTTCCAGCTTATTACAATCATTTTAAAGAGAATCAAAATACTCTATTAACAAAATATTATGGCCTGCATTGTGTAAAGTTAAATGGACCTATCCAAAGGAAGGTTAGATTTATCATAATGGGAAACCTCTTTTCTTCTGGGCATATCACACATAGACGCTATGATTTGAAGGGTTCTTCGCTTGGTCGCACGTCAGATAAACTTGAGACAGAGATTAGTGAAACAACTATTCTTAAAGATCTTGACCTTAATTTTATATTTCTACTTCAGAAATCTTGGTTTCAAGAGTTTAGCAGACAAGTTGATATGGATTGTGAGCTTTTAGAACAAGAGGGAATTATGGACTATAGTTTGCTACTTGGCATTCATTTCAAAAATATATCTCCAGATGGGGATATTCTTCCTATAGCACCTCCGACTCCTTCCGGTGATTCAGAGAACGAAGGAACTCTACACACTTCAACGGAAGACACAGAACAAAATCCTTCCGATCCTTCTAGTACAATATTAGGTATAAATATTCCAGCAAAAGCAGAAAGGACAGTGAGAAGAGGCGATATCGAAACACAATTAGTCGGAGAACCAATTGAAGAGTTCTATAGTGTTCAACTTACTTTTGGTATCATAGACATACTTCAAGACTATGATATCAGCAAGAAGCTTGAGCATGCTTACAAATCTATTCAATATGATCCTACCTCAATATCAGCCGTTGATCCTAGACAATACTCAAGGCGTTTTCGTGATTTTATATTTAGAATATTCACAGAAGAACAAATTCTTGAAATCTAG 2400 0.3929 MIGKDGGVFKAWEATVRRTHAVAKKRANSIFGIGTLSISGTDDEENNSISDNEDHGNETFEIYNEEKVLPNGDYYTGQWAENFPHGEGKYLWTDGCMYVGEWFKGKTKGKGRFSWPSGATYEGQFKSGFMDGVGTYTGCNGETYKGNWVLNLKHGHGYKSYVNGDWYEGDWRRGLQDGKGRYEWRDMSHYIGEWKNGVIWGKGSFFWPNGNSFEGFWEDGLPKGDGTYRWQDGSCYIGTFNKDGMNKDEDGTLYPMDPSDERWNYWDPLELYNELNGYSVSPGEKVLVLPSQKKLAVWRSTKGGESVRPRRMSVDGRVSIGADKPTDRMNLWDGGGSSHGGGCHGGGGGDGDASTGGNRTPPLGSEFDEESIGSRIDDANDALNQLQPLKAPKKAKRQGETICKGHKNFELMLNLQLGIRHSVARPAPTASLDLKPSAFDPKEKVWTRFPPEGSKYTPPHPSCDFKWKDYCPVVFRTLRKLFNVDPADYMLSICGSEALRELSSPGKSGSFFYLTNDDRYMIKTMKKAEVKVLIKMLPAYYNHFKENQNTLLTKYYGLHCVKLNGPIQRKVRFIIMGNLFSSGHITHRRYDLKGSSLGRTSDKLETEISETTILKDLDLNFIFLLQKSWFQEFSRQVDMDCELLEQEGIMDYSLLLGIHFKNISPDGDILPIAPPTPSGDSENEGTLHTSTEDTEQNPSDPSSTILGINIPAKAERTVRRGDIETQLVGEPIEEFYSVQLTFGIIDILQDYDISKKLEHAYKSIQYDPTSISAVDPRQYSRRFRDFIFRIFTEEQILEI* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g1396 799 PIRSF PIP5K_plant 14 795 IPR017163 GO:0005524|GO:0016308
Tpr6g1396 799 Pfam MORN repeat 190 211 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 213 234 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 121 142 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 167 186 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 144 165 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 98 119 IPR003409 -
Tpr6g1396 799 Pfam MORN repeat 75 97 IPR003409 -
Tpr6g1396 799 Gene3D - 579 791 - -
Tpr6g1396 799 Gene3D - 150 196 - -
Tpr6g1396 799 Gene3D - 197 257 - -
Tpr6g1396 799 Gene3D - 100 149 - -
Tpr6g1396 799 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 17 794 IPR023610 -
Tpr6g1396 799 MobiDBLite consensus disorder prediction 679 702 - -
Tpr6g1396 799 SMART morn 119 140 IPR003409 -
Tpr6g1396 799 SMART morn 188 209 IPR003409 -
Tpr6g1396 799 SMART morn 73 94 IPR003409 -
Tpr6g1396 799 SMART morn 211 232 IPR003409 -
Tpr6g1396 799 SMART morn 142 163 IPR003409 -
Tpr6g1396 799 SMART morn 165 186 IPR003409 -
Tpr6g1396 799 SMART morn 96 117 IPR003409 -
Tpr6g1396 799 PANTHER PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 17 794 - -
Tpr6g1396 799 SMART PIPK_2 435 792 IPR002498 GO:0016307|GO:0046488
Tpr6g1396 799 CDD PIPKc_AtPIP5K_like 408 790 - -
Tpr6g1396 799 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 405 791 IPR002498 GO:0016307|GO:0046488
Tpr6g1396 799 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 394 578 IPR027484 -
Tpr6g1396 799 SUPERFAMILY SAICAR synthase-like 404 791 - -
Tpr6g1396 799 MobiDBLite consensus disorder prediction 677 702 - -
Tpr6g1396 799 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 494 789 IPR002498 GO:0016307|GO:0046488
Tpr6g1396 799 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 70 174 - -
Tpr6g1396 799 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 162 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g1396 Tpr-Chr6 15001370 15005603 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g1396 1 794 Acyl Lipid Metabolism Gene Families AT3G56960 61.338 0.0 997
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g1396 K00889 - gmx:100808754 1286.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g1396 6 15001370 15005603 Tpr6g1396 6 15001370 15005603 ECH